Evidence map›Paper›PMID 23260666›Full record

ArticleCell reports2012

Highly coordinated proteome dynamics during reprogramming of somatic cells to pluripotency.

Jenny Hansson, Mahmoud Reza Rafiee, Sonja Reiland, Jose M Polo, Julian Gehring, Satoshi Okawa, Wolfgang Huber, Konrad Hochedlinger, Jeroen Krijgsveld

Abstract read
In one paragraph

Article in Cell reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 150 papers.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

150 citing papers in PubMed.

  1. Review
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  14. Metabolic control of induced pluripotency.Frontiers in cell and developmental biology · 2023
    Review
  15. Review
  16. Article
  17. Article
  18. Dual Mode of Mitochondrial ROS Action during Reprogramming to Pluripotency.International journal of molecular sciences · 2022
    Article
  19. Article
  20. Article

90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jenny HanssonEuropean Molecular Biology Laboratory, Genome Biology Unit, Heidelberg, Germany.
Mahmoud Reza Rafiee
Sonja Reiland
Jose M Polo
Julian Gehring
Satoshi Okawa
Wolfgang Huber
Konrad Hochedlinger
Jeroen Krijgsveld

Funding

Transcription Factor Induced ReprogrammingR01HD058013 · NICHD · MASSACHUSETTS GENERAL HOSPITAL · PI HOCHEDLINGER, KONRAD · 2010 to 2019
$4.4M
NICHD NIH HHS R01 HD058013
6 · The paper itself

Abstract

Generation of induced pluripotent stem cells (iPSCs) is a process whose mechanistic underpinnings are only beginning to emerge. Here, we applied in-depth quantitative proteomics to monitor proteome changes during the course of reprogramming of fibroblasts to iPSCs. We uncover a two-step resetting of the proteome during the first and last 3 days of reprogramming, with multiple functionally related proteins changing in expression in a highly coordinated fashion. This comprised several biological processes, including changes in the stoichiometry of electron transport-chain complexes, repressed vesicle-mediated transport during the intermediate stage, and an EMT-like process in the late phase. In addition, we demonstrate that the nucleoporin Nup210 is essential for reprogramming by its permitting of rapid cellular proliferation and subsequent progression through MET. Along with the identification of proteins expressed in a stage-specific manner, this study provides a rich resource toward an enhanced mechanistic understanding of cellular reprogramming.

Indexed as

Cell ProliferationAnimalsCell LineInduced Pluripotent Stem CellsMiceNuclear Pore Complex ProteinsProteomeNuclear Pore Complex ProteinsNup210 protein, mouseProteome

Identifiers

PMID23260666
PMCPMC4438680

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.