Evidence map›Paper›PMID 23258266›Full record

ArticleMicrobiology (Reading, England)2013

Analysis of the small RNA P16/RgsA in the plant pathogen Pseudomonas syringae pv. tomato strain DC3000.

So Hae Park, Bronwyn G Butcher, Zoe Anderson, Nola Pellegrini, Zhongmeng Bao, Katherine D'Amico, Melanie J Filiatrault

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Specific and Global RNA Regulators inInternational journal of molecular sciences · 2021
    Review
  5. Article
  6. Article
  7. CaJournal of bacteriology · 2018
    Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

So Hae ParkDepartment of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, NY 14853, USA.
Bronwyn G ButcherDepartment of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, NY 14853, USA.
Zoe AndersonDepartment of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, NY 14853, USA.
Nola PellegriniPlant-Microbe Interactions Research Unit, Robert W. Holley Center for Agriculture and Health, Agricultural Research Service, United States Department of Agriculture, Ithaca, NY 14853, USA.
Zhongmeng BaoDepartment of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, NY 14853, USA.
Katherine D'AmicoPlant-Microbe Interactions Research Unit, Robert W. Holley Center for Agriculture and Health, Agricultural Research Service, United States Department of Agriculture, Ithaca, NY 14853, USA.
Melanie J FiliatraultPlant-Microbe Interactions Research Unit, Robert W. Holley Center for Agriculture and Health, Agricultural Research Service, United States Department of Agriculture, Ithaca, NY 14853, USA.
Cornell University · USRobert W. Holley Center for Agriculture & Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria contain small non-coding RNAs (ncRNAs) that are responsible for altering transcription, translation or mRNA stability. ncRNAs are important because they regulate virulence factors and susceptibility to various stresses. Here, the regulation of a recently described ncRNA of Pseudomonas syringae pv. tomato DC3000, P16, was investigated. We determined that RpoS regulates the expression of P16. We found that deletion of P16 results in increased sensitivity to hydrogen peroxide compared to the wild-type strain, suggesting that P16 plays a role in the bacteria's susceptibility to oxidative stress. Additionally the P16 mutant displayed enhanced resistance to heat stress. Our findings provide new information on the regulation and role of this ncRNA in P. syringae.

Indexed as

Gene Expression Regulation, BacterialGene DeletionHot TemperatureHydrogen PeroxideOxidative StressPlant DiseasesPseudomonas syringaeRNA, Small InterferingSolanum lycopersicumStress, PhysiologicalHydrogen PeroxideRNA, Small Interfering

Identifiers

PMID23258266
PMCPMC3709562
OpenAlexW2129078096

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.