Evidence map›Paper›PMID 23257908›Full record

ArticleMicrobes and environments2013

Identification and phylogenetic characterization of cobalamin biosynthetic genes of Ensifer adhaerens.

Hoan Thi Vu, Hideomi Itoh, Satoshi Ishii, Keishi Senoo, Shigeto Otsuka

Abstract read
In one paragraph

Article in Microbes and environments, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hoan Thi VuDepartment of Applied Biological Chemistry, The University of Tokyo, Tokyo, Japan.
Hideomi Itoh
Satoshi Ishii
Keishi Senoo
Shigeto Otsuka

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ensifer adhaerens CSBa was screened as a cobalamin producer. The draft genome sequence revealed that the strain possesses 22 cobalamin biosynthetic genes (cob genes). The cob gene arrangement on the genome of E. adhaerens CSBa was similar to that of other Ensifer species, and most similar to that of Pseudomonas denitrificans SC510. The cobN sequence phylogeny was generally congruent with that of the 16S rRNA gene, and it is suggeted that E. adhaerens CSBa might have inherited the cob genes from common ancestors of the Ensifer species. It was also suggested that the cob genes can be laterally transferred.

Indexed as

Genes, BacterialGenome, BacterialPhylogenyBacterial ProteinsMolecular Sequence DataRhizobiaceaeRNA, Ribosomal, 16SSequence Analysis, DNAVitamin B 12Bacterial ProteinsRNA, Ribosomal, 16SVitamin B 12

Identifiers

PMID23257908
PMCPMC4070679

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.