ArticleBMC plant biology2012
Analysis of ripening-related gene expression in papaya using an Arabidopsis-based microarray.
Article in BMC plant biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed, 53 citations in OpenAlex.
- Dissecting the effect of soil on plant phenology and berry transcriptional plasticity in two Italian grapevine varieties (Horticulture research · 2023Article
- Whole Transcriptome Analyses of Apricots and Japanese Plum Fruits after 1-MCP (Ethylene-Inhibitor) and Ethrel (Ethylene-Precursor) Treatments Reveal New Insights into the Physiology of the Ripening Process.International journal of molecular sciences · 2022Article
- Biochemical, Sensory, and Molecular Evaluation of Flavour and Consumer Acceptability in Australian Papaya (International journal of molecular sciences · 2022Article
- The Complex Biological Effects of Pectin: Galectin-3 Targeting as Potential Human Health Improvement?Biomolecules · 2022Review
- Genomic Approaches for Improvement of Tropical Fruits: Fruit Quality, Shelf Life and Nutrient Content.Genes · 2021Review
- Papaya (Genes · 2021Review
- Systems Biology Applied to the Study of Papaya Fruit Ripening: The Influence of Ethylene on Pulp Softening.Cells · 2021Article
- Discovery of SNPs and InDels in papaya genotypes and its potential for marker assisted selection of fruit quality traits.Scientific reports · 2021Article
- Ethylene and Auxin: Hormonal Regulation of Volatile Compound Production During Tomato (Frontiers in plant science · 2021Article
- Comparative proteomic analysis provides novel insights into the regulation mechanism underlying papaya (Carica papaya L.) exocarp during fruit ripening process.BMC plant biology · 2019Article
- Fast and Furious: Ethylene-Triggered Changes in the Metabolism of Papaya Fruit During Ripening.Frontiers in plant science · 2019Review
- Timing and Order of the Molecular Events Marking the Onset of Berry Ripening in Grapevine.Plant physiology · 2018Article
- Isolation of ripening-related genes from ethylene/1-MCP treated papaya through RNA-seq.BMC genomics · 2017Article
- Physiological Degradation of Pectin in Papaya Cell Walls: Release of Long Chains Galacturonans Derived from Insoluble Fractions during Postharvest Fruit Ripening.Frontiers in plant science · 2016Article
- Identification of Gene Modules Associated with Low Temperatures Response in Bambara Groundnut by Network-Based Analysis.PloS one · 2016Article
- Integrated network analysis identifies fight-club nodes as a class of hubs encompassing key putative switch genes that induce major transcriptome reprogramming during grapevine development.The Plant cell · 2014Article
- Analysis of papaya cell wall-related genes during fruit ripening indicates a central role of polygalacturonases during pulp softening.PloS one · 2014Article
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Corrections and comments
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Authors and funding
8 authors at 2 institutions in 2 countries.
Funding
Abstract
backgroundPapaya (Carica papaya L.) is a commercially important crop that produces climacteric fruits with a soft and sweet pulp that contain a wide range of health promoting phytochemicals. Despite its importance, little is known about transcriptional modifications during papaya fruit ripening and their control. In this study we report the analysis of ripe papaya transcriptome by using a cross-species (XSpecies) microarray technique based on the phylogenetic proximity between papaya and Arabidopsis thaliana.
resultsPapaya transcriptome analyses resulted in the identification of 414 ripening-related genes with some having their expression validated by qPCR. The transcription profile was compared with that from ripening tomato and grape. There were many similarities between papaya and tomato especially with respect to the expression of genes encoding proteins involved in primary metabolism, regulation of transcription, biotic and abiotic stress and cell wall metabolism. XSpecies microarray data indicated that transcription factors (TFs) of the MADS-box, NAC and AP2/ERF gene families were involved in the control of papaya ripening and revealed that cell wall-related gene expression in papaya had similarities to the expression profiles seen in Arabidopsis during hypocotyl development.
conclusionThe cross-species array experiment identified a ripening-related set of genes in papaya allowing the comparison of transcription control between papaya and other fruit bearing taxa during the ripening process.
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