Evidence map›Paper›PMID 23256533›Full record

ArticleBMC microbiology2012

Delayed accumulation of intestinal coliform bacteria enhances life span and stress resistance in Caenorhabditis elegans fed respiratory deficient E. coli.

Fernando Gomez, Gabriela C Monsalve, Vincent Tse, Ryoichi Saiki, Emily Weng, Laura Lee, Chandra Srinivasan, Alison R Frand, Catherine F Clarke

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Microorganisms · 2023
    Article
  7. Article
  8. Caenorhabditis elegans: a model to understand host-microbe interactions.Cellular and molecular life sciences : CMLS · 2020
    Review
  9. Article
  10. Article
  11. Article
  12. The Foodborne StrainMicroorganisms · 2019
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Dialogue between E. coli free radical pathways and the mitochondria of C. elegans.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  20. The invertebrate Caenorhabditis elegans biosynthesizes ascorbate.Archives of biochemistry and biophysics · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Fernando GomezMolecular Biology Institute, University of California, Los Angeles, CA 90095, USA.
Gabriela C Monsalve
Vincent Tse
Ryoichi Saiki
Emily Weng
Laura Lee
Chandra Srinivasan
Alison R Frand
Catherine F Clarke
University of California, Los Angeles · USCalifornia State University, Fullerton · US

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Coenzyme Q and Aging in Caenorhabditis elegansR01AG019777 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CLARKE, CATHERINE FREITAG · 2002 to 2006
$1.4M
Sterol and Coenzyme Q metabolism in C. elegansF31GM082094 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GOMEZ, FERNANDO · 2007 to 2010
$117k
Coenzyme Q and Aging in Caenorhabditis elegansR55AG019777 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CLARKE, CATHERINE FREITAG · 2001 to 2001
$100k
NIA NIH HHS AG19777NIGMS NIH HHS F31GM082094-04NIGMS NIH HHS GM007185NIH HHS P40 OD010440
6 · The paper itself

Abstract

backgroundStudies with the nematode model Caenorhabditis elegans have identified conserved biochemical pathways that act to modulate life span. Life span can also be influenced by the composition of the intestinal microbiome, and C. elegans life span can be dramatically influenced by its diet of Escherichia coli. Although C. elegans is typically fed the standard OP50 strain of E. coli, nematodes fed E. coli strains rendered respiratory deficient, either due to a lack coenzyme Q or the absence of ATP synthase, show significant life span extension. Here we explore the mechanisms accounting for the enhanced nematode life span in response to these diets.

resultsThe intestinal load of E. coli was monitored by determination of worm-associated colony forming units (cfu/worm or coliform counts) as a function of age. The presence of GFP-expressing E. coli in the worm intestine was also monitored by fluorescence microscopy. Worms fed the standard OP50 E. coli strain have high cfu and GFP-labeled bacteria in their guts at the L4 larval stage, and show saturated coliform counts by day five of adulthood. In contrast, nematodes fed diets of respiratory deficient E. coli lacking coenzyme Q lived significantly longer and failed to accumulate bacteria within the lumen at early ages. Animals fed bacteria deficient in complex V showed intermediate coliform numbers and were not quite as long-lived. The results indicate that respiratory deficient Q-less E. coli are effectively degraded in the early adult worm, either at the pharynx or within the intestine, and do not accumulate in the intestinal tract until day ten of adulthood.

conclusionsThe findings of this study suggest that the nematodes fed the respiratory deficient E. coli diet live longer because the delay in bacterial colonization of the gut subjects the worms to less stress compared to worms fed the OP50 E. coli diet. This work suggests that bacterial respiration can act as a virulence factor, influencing the ability of bacteria to colonize and subsequently harm the animal host. Respiratory deficient bacteria may pose a useful model for probing probiotic relationships within the gut microbiome in higher organisms.

Indexed as

LongevityStress, PhysiologicalAnimalsATP Synthetase ComplexesCaenorhabditis elegansEscherichia coliGastrointestinal TractMetabolic Networks and PathwaysUbiquinoneATP Synthetase ComplexesUbiquinone

Identifiers

PMID23256533
PMCPMC3548685
OpenAlexW2059019855

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.