Evidence map›Paper›PMID 23255804›Full record

ArticleJournal of virology2013

Dissecting the role of COPI complexes in influenza virus infection.

Eileen Sun, Jiang He, Xiaowei Zhuang

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 1 synthesis or guideline pooled it, 50 citations in OpenAlex.

  1. Pooled it
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  6. Article
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  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Eileen SunProgram in Virology, Harvard Medical School, Cambridge, Massachusetts, USA.
Jiang He
Xiaowei Zhuang
Harvard University · USHoward Hughes Medical Institute · US

Funding

Super-resolution studies of the entry mechanisms of influenza virusesR01GM068518 · NIGMS · HARVARD UNIVERSITY · PI ZHUANG, XIAOWEI · 2004 to 2014
$2.9M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM068518NIGMS NIH HHS R01GM068518
6 · The paper itself

Abstract

As an obligate pathogen, influenza virus requires host cell factors and compartments to mediate productive infection and to produce infectious progeny virus. Recently, several small interfering RNA (siRNA) knockdown screens revealed influenza virus host dependency proteins, all of which identified at least two subunits of the coat protein I (COPI) complex. COPI proteins oligomerize to form coated vesicles that transport contents between the Golgi apparatus and the endoplasmic reticulum, and they have also been reported to mediate endosomal trafficking. However, it remains unclear which steps in the influenza virus infection cycle rely on the COPI complex. Upon systematic dissection of the influenza virus infection cycle, from entry to progeny virion production, we found that prolonged exposure to COPI complex disruption through siRNA depletion resulted in significant defects in virus internalization and trafficking to late endosomes. Acute inhibition of COPI complex recruitment to the Golgi apparatus with pharmacological compounds failed to recapitulate the same entry defects as observed with the COPI-depleted cells but did result in specific decreases in viral membrane protein expression and assembly, leading to defects in progeny virion production. Taken together, our findings suggest that COPI complexes likely function indirectly in influenza virus entry but play direct roles in viral membrane protein expression and assembly.

Indexed as

Cell Line, TumorCoated VesiclesCoat Protein Complex IEndoplasmic ReticulumEndosomesGolgi ApparatusHumansInfluenza A virusProtein TransportRNA InterferenceRNA, Small InterferingViral Matrix ProteinsViral ProteinsVirus InternalizationCoat Protein Complex IRNA, Small InterferingViral Matrix ProteinsViral Proteins

Identifiers

PMID23255804
PMCPMC3571408
OpenAlexW1980562857

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.