Evidence map›Paper›PMID 23255798›Full record

ArticleJournal of virology2013

Early antigen presentation of protective HIV-1 KF11Gag and KK10Gag epitopes from incoming viral particles facilitates rapid recognition of infected cells by specific CD8+ T cells.

Henrik N Kløverpris, Rebecca P Payne, Jonah B Sacha, Jane T Rasaiyaah, Fabian Chen, Masafumi Takiguchi, Otto O Yang, Greg J Towers, Philip Goulder, Julia G Prado

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 44 citations in OpenAlex.

  1. Trial
  2. HLA-B*14:02-Restricted Env-Specific CD8Journal of virology · 2017
    Trial
  3. Trial
  4. Article
  5. CD8Nature communications · 2023
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Immune Control of HIV.Journal of life sciences (Westlake Village, Calif.) · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. CD8Retrovirology · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 8 institutions in 4 countries.

Henrik N KløverprisDepartment of Paediatrics, University of Oxford, United Kingdom.
Rebecca P Payne
Jonah B Sacha
Jane T Rasaiyaah
Fabian Chen
Masafumi Takiguchi
Otto O Yang
Greg J Towers
Philip Goulder
Julia G Prado
University of Oxford · GBIrsiCaixa · ESKumamoto University · JPMedical Research Council · GBOregon National Primate Research Center · USRoyal Berkshire Hospital · GBUniversity College London · GBUniversity of California, Los Angeles · US

Funding

Optimizing CD8+ T-cell responses against C clade HIV infection in subSaharan AfriR01AI046995 · NIAID · UNIVERSITY OF OXFORD · PI GOULDER, PHILIP J · 2000 to 2014
$6.8M
Medical Research Council G0501446Medical Research Council G0801172Medical Research Council G0900950Medical Research Council G9721629NIAID NIH HHS R01 AI046995Wellcome Trust 090940
6 · The paper itself

Abstract

CD8(+) T cells are major players in antiviral immunity against human immunodeficiency virus type 1 (HIV-1) through recognition of viral epitopes presented on the surface of infected cells. However, the early events involving HIV-1 epitope presentation to CD8(+) T cells remain poorly understood but are nonetheless crucial for the rapid clearance of virus-infected cells. Here, we comprehensively studied the kinetics of antigen presentation of two protective epitopes, KF11Gag and KK10Gag, restricted by HLA alleles B*57:01 and B*27:05, respectively, and compared these to KY9Pol and VL9Vpr epitopes in a single cycle of HIV-1 replication. We consistently demonstrate differences in epitope presentation kinetics, with very early presentation, within 3 h postinfection, for the protective KF11Gag, KK10Gag epitopes, and KY9Pol but only late presentation for VL9Vpr. We show that this early presentation relies on the antigen being presented from incoming viral particles and is correlated with rapid CD8(+) T cell activation and clearance of virus-infected cells. Additionally, our data indicate a dose-response dependency between the levels of CD8(+) T cell activation and the amount of virus inoculum. These data reflect a proof of principle emphasizing the importance of identifying early-presented viral epitopes for rapid elimination of HIV-1-infected cells.

Indexed as

Antigen PresentationCD8-Positive T-LymphocytesCell LineEpitopesEpitopes, T-Lymphocytegag Gene Products, Human Immunodeficiency VirusHIV-1HIV InfectionsHumansLymphocyte ActivationVirus ReplicationEpitopesEpitopes, T-Lymphocytegag Gene Products, Human Immunodeficiency Virus

Identifiers

PMID23255798
PMCPMC3571362
OpenAlexW2152108314

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.