Evidence map›Paper›PMID 23254434›Full record

ArticleAntimicrobial agents and chemotherapy2013

The genetic environment of the cfr gene and the presence of other mechanisms account for the very high linezolid resistance of Staphylococcus epidermidis isolate 426-3147L.

Jacqueline LaMarre, Rodrigo E Mendes, Teresa Szal, Stefan Schwarz, Ronald N Jones, Alexander S Mankin

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 40 citations in OpenAlex.

  1. The Evolution of Symbiosis inBiomolecules · 2026
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  9. Prevalence and mechanisms of linezolid resistance among staphylococcal clinical isolates from Egypt.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
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  12. Review
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  14. Article
  15. Article
  16. Article
  17. Article
  18. tRNAs as antibiotic targets.International journal of molecular sciences · 2014
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jacqueline LaMarreCenter for Pharmaceutical Biotechnology, University of Illinois at Chicago, Chicago, IL, USA.
Rodrigo E Mendes
Teresa Szal
Stefan Schwarz
Ronald N Jones
Alexander S Mankin
University of Illinois Chicago · USJMI Laboratories · USFriedrich-Loeffler-Institut · DE

Funding

New mechanism of resistance to oxazolidinone antibiotics in Staphylococcus aureusR01AI072445 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MANKIN, ALEXANDER S · 2007 to 2010
$1.6M
NIAID NIH HHS R01 AI072445NIAID NIH HHS R01AI072445
6 · The paper itself

Abstract

The clinical Staphylococcus epidermidis isolate 426-3147L exhibits an unusually high resistance to linezolid that exceeds 256 μg/ml. The presence of the cfr gene, encoding the RNA methyltransferase targeting an rRNA nucleotide located in the linezolid binding site, accounts for a significant fraction of resistance. The association of cfr with a multicopy plasmid is one of the factors that contribute to its elevated expression. Mapping of the cfr transcription start sites identified the native cfr promoter. Furthermore, analysis of the cfr transcripts in Staphylococcus epidermidis 426-3147L showed that some of them originate from the upstream plasmid-derived promoters whose activity contributes to efficient cfr transcription. The genetic environment of the cfr gene and its idiosyncratic transcription pattern result in increased activity of Cfr methyltransferase, leading to a high fraction of the ribosomes being methylated at A2503 of the 23S rRNA. Curing of the Staphylococcus epidermidis 426-3147L isolate from the cfr-containing plasmid reduced the linezolid MIC to 64 μg/ml, indicating that other determinants contribute to resistance. Nucleotide sequence analysis revealed the presence of the C2534T mutation in two of the six 23S rRNA gene alleles as well as the presence of mutations in the genes of ribosomal proteins L3 and L4, which were previously implicated in linezolid resistance. Thus, the combination of resistance mechanisms operating through alteration of the drug target site appears to cause an unusually high level of linezolid resistance in the isolate.

Indexed as

Gene Expression Regulation, BacterialAcetamidesAgedAllelesAnti-Bacterial AgentsBacterial ProteinsDrug Resistance, Multiple, BacterialFemaleHumansLinezolidMethyltransferasesMicrobial Sensitivity TestsMutationOxazolidinonesPlasmidsPromoter Regions, GeneticAcetamidesAnti-Bacterial AgentsBacterial ProteinsLinezolidMethyltransferasesOxazolidinonesRibosomal ProteinsRNA, MessengerRNA, Ribosomal, 23S

Identifiers

PMID23254434
PMCPMC3591885
OpenAlexW2088760041

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.