Evidence map›Paper›PMID 23251783›Full record

ArticleeLife2012

DNA-PK is a DNA sensor for IRF-3-dependent innate immunity.

Brian J Ferguson, Daniel S Mansur, Nicholas E Peters, Hongwei Ren, Geoffrey L Smith

Open access · goldAbstract read
In one paragraph

Article in eLife, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 257 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
257citing papers in PubMed, 1 pooled it
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

257 citing papers in PubMed, 1 synthesis or guideline pooled it, 406 citations in OpenAlex.

  1. Pooled it
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    Review
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  20. Article

197 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Brian J FergusonDepartment of Virology , Imperial College London , London , United Kingdom ; Department of Pathology , University of Cambridge , Cambridge , United Kingdom.
Daniel S Mansur
Nicholas E Peters
Hongwei Ren
Geoffrey L Smith
Imperial College London · GBUniversity of Cambridge · GB

Funding

Medical Research Council G0800101Medical Research Council G0800151Medical Research Council G1000207Wellcome Trust 090315
6 · The paper itself

Abstract

Innate immunity is the first immunological defence against pathogens. During virus infection detection of nucleic acids is crucial for the inflammatory response. Here we identify DNA-dependent protein kinase (DNA-PK) as a DNA sensor that activates innate immunity. We show that DNA-PK acts as a pattern recognition receptor, binding cytoplasmic DNA and triggering the transcription of type I interferon (IFN), cytokine and chemokine genes in a manner dependent on IFN regulatory factor 3 (IRF-3), TANK-binding kinase 1 (TBK1) and stimulator of interferon genes (STING). Both cells and mice lacking DNA-PKcs show attenuated cytokine responses to both DNA and DNA viruses but not to RNA or RNA virus infection. DNA-PK has well-established functions in the DNA repair and V(D)J recombination, hence loss of DNA-PK leads to severe combined immunodeficiency (SCID). However, we now define a novel anti-microbial function for DNA-PK, a finding with implications for host defence, vaccine development and autoimmunity.DOI:http://dx.doi.org/10.7554/eLife.00047.001.

Indexed as

Immunity, InnateAnimalsCytokinesDNA-Activated Protein KinaseDNA-Binding ProteinsDNA RepairDNA, ViralEmbryo, MammalianFibroblastsGene Expression RegulationHerpesvirus 1, HumanInfluenza A virusInterferon Regulatory Factor-3Interferon Type IMembrane ProteinsMiceCytokinesDNA-Activated Protein KinaseDNA-Binding ProteinsDNA, ViralInterferon Regulatory Factor-3Interferon Type IIrf3 protein, mouseMembrane ProteinsNuclear ProteinsPrkdc protein, mouseProtein Serine-Threonine KinasesSting1 protein, mouseSTING ProteinTbk1 protein, mouseDNA-PKinflammationinnate immunityMousepattern recognitionvaccinia virusViruses

Identifiers

PMID23251783
PMCPMC3524801
OpenAlexW2158542519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.