Evidence map›Paper›PMID 23251683›Full record

ArticlePloS one2012

Amelogenesis imperfecta in two families with defined AMELX deletions in ARHGAP6.

Jan C-C Hu, Hui-Chen Chan, Stephen G Simmer, Figen Seymen, Amelia S Richardson, Yuanyuan Hu, Rachel N Milkovich, Ninna M R P Estrella, Mine Yildirim, Merve Bayram and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. International journal of molecular sciences · 2024
    Article
  3. Frontiers in physiology · 2023
    Article
  4. Article
  5. Article
  6. Morbidity in 47,XYY syndrome: a nationwide epidemiological study of hospital diagnoses and medication use.Genetics in medicine : official journal of the American College of Medical Genetics · 2020
    Article
  7. AMELX Gene Association with Dental Caries in Iranian Adults.International journal of molecular and cellular medicine · 2019
    Article
  8. Article
  9. Inhibitory effects of Arhgap6 on cervical carcinoma cells.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Jan C-C HuDepartment of Biologic and Materials Sciences, University of Michigan School of Dentistry, Ann Arbor, Michigan, USA. janhu@umich.edu
Hui-Chen Chan
Stephen G Simmer
Figen Seymen
Amelia S Richardson
Yuanyuan Hu
Rachel N Milkovich
Ninna M R P Estrella
Mine Yildirim
Merve Bayram
Chiung-Fen Chen
James P Simmer
University of Michigan–Ann Arbor · USMichigan United · USIstanbul University · TR

Funding

Proteomics and Genetics of Enamel and DentinR01DE015846 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HU, JAN CHING CHUN · 2004 to 2019
$5.7M
Functional Studies of Kallikrein 4R01DE019775 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SIMMER, JAMES P · 2009 to 2013
$1.8M
Genetic Mechanisms of Amelogenesis ImperfectaR56DE015846 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HU, JAN CHING CHUN · 2021 to 2021
$402k
NIDCR NIH HHS DE015846NIDCR NIH HHS DE019775NIDCR NIH HHS R01 DE015846NIDCR NIH HHS R01 DE019775NIDCR NIH HHS R56 DE015846
6 · The paper itself

Abstract

Amelogenesis imperfecta (AI) is a group of inherited conditions featuring isolated enamel malformations. About 5% of AI cases show an X-linked pattern of inheritance, which are caused by mutations in AMELX. In humans there are two, non-allelic amelogenin genes: AMELX (Xp22.3) and AMELY (Yp11.2). About 90% of amelogenin expression is from AMELX, which is nested within intron 1 of the gene encoding Rho GTPase activating protein 6 (ARHGAP6). We recruited two AI families and determined that their disease-causing mutations were partial deletions in ARHGAP6 that completely deleted AMELX. Affected males in both families had a distinctive enamel phenotype resembling "snow-capped" teeth. The 96,240 bp deletion in family 1 was confined to intron 1 of ARHGAP6 (g.302534_398773del96240), but removed alternative ARHGAP6 promoters 1c and 1d. Analyses of developing teeth in mice showed that ARHGAP6 is not expressed from these promoters in ameloblasts. The 52,654 bp deletion in family 2 (g.363924_416577del52654insA) removed ARHGAP6 promoter 1d and exon 2, precluding normal expression of ARHGAP6. The male proband of family 2 had slightly thinner enamel with greater surface roughness, but exhibited the same pattern of enamel malformations characteristic of males in family 1, which themselves showed minor variations in their enamel phenotypes. We conclude that the enamel defects in both families were caused by amelogenin insufficiency, that deletion of AMELX results in males with a characteristic snow-capped enamel phenotype, and failed ARHGAP6 expression did not appreciably alter the severity of enamel defects when AMELX was absent.

Indexed as

Sequence DeletionAdolescentAmelogenesis ImperfectaAmelogeninAnimalsChildChild, PreschoolDental EnamelDental Enamel ProteinsExonsGenetic Predisposition to DiseaseGTPase-Activating ProteinsHumansIntronsMaleMiceAmelogeninAMELX protein, humanARHGAP6 protein, humanDental Enamel ProteinsGTPase-Activating Proteins

Identifiers

PMID23251683
PMCPMC3522662
OpenAlexW2009159442

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.