Evidence map›Paper›PMID 23249736›Full record

ArticleGenes & development2012

RNF8 regulates active epigenetic modifications and escape gene activation from inactive sex chromosomes in post-meiotic spermatids.

Ho-Su Sin, Artem Barski, Fan Zhang, Andrey V Kartashov, Andre Nussenzweig, Junjie Chen, Paul R Andreassen, Satoshi H Namekawa

Erratum issuedOpen access · diamondAbstract read
In one paragraph

Article in Genes & development, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 148 citations in OpenAlex.

  1. Review
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  10. Protein crotonylation: Basic research and clinical diseases.Biochemistry and biophysics reports · 2024
    Review
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Ho-Su SinDivision of Reproductive Sciences, Perinatal Institute, Cincinnati Children’s Hospital Medical Center, Cincinnati, Ohio 45229, USA.
Artem Barski
Fan Zhang
Andrey V Kartashov
Andre Nussenzweig
Junjie Chen
Paul R Andreassen
Satoshi H Namekawa
University of Cincinnati Medical Center · USCincinnati Children's Hospital Medical Center · USInstitute of Human Genetics · PLNational Cancer Institute · USThe University of Texas MD Anderson Cancer Center · US

Funding

DNA RepairZIABC010283 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI NUSSENZWEIG, ANDRE A. · 2009 to 2025
$27.0M
Relationship between DNA damage detection and signalingZIABC010959 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI NUSSENZWEIG, ANDRE A. · 2009 to 2025
$27.0M
Study the Role of DNA Damage Responses in Tumorigenesis and SenescenceR01CA092312 · NCI · YALE UNIVERSITY · PI CHEN, JUNJIE · 2001 to 2015
$3.5M
DNA Damage Response Pathways in Meiotic Sex Chromosome InactivationR01GM098605 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI NAMEKAWA, SATOSHI · 2011 to 2020
$3.3M
FANCD2 Monoubiquitination in DNA Damage ResponsesR01HL085587 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI ANDREASSEN, PAUL R · 2008 to 2012
$1.9M
Role of Chromatin and Gene Poising in T Cell Differentiation and ActivationK22HL098691 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI BARSKI, ARTEM · 2011 to 2013
$807k
Intramural NIH HHSNCI NIH HHS CA092312NCI NIH HHS R01 CA092312NHLBI NIH HHS HL085587NHLBI NIH HHS HL098691NHLBI NIH HHS K22 HL098691NHLBI NIH HHS R01 HL085587NIGMS NIH HHS GM098605NIGMS NIH HHS R01 GM098605
6 · The paper itself

Abstract

Sex chromosomes are uniquely subject to chromosome-wide silencing during male meiosis, and silencing persists into post-meiotic spermatids. Against this background, a select set of sex chromosome-linked genes escapes silencing and is activated in post-meiotic spermatids. Here, we identify a novel mechanism that regulates escape gene activation in an environment of chromosome-wide silencing in murine germ cells. We show that RNF8-dependent ubiquitination of histone H2A during meiosis establishes active epigenetic modifications, including dimethylation of H3K4 on the sex chromosomes. RNF8-dependent active epigenetic memory, defined by dimethylation of H3K4, persists throughout meiotic division. Various active epigenetic modifications are subsequently established on the sex chromosomes in post-meiotic spermatids. These RNF8-dependent modifications include trimethylation of H3K4, histone lysine crotonylation (Kcr), and incorporation of the histone variant H2AFZ. RNF8-dependent epigenetic programming regulates escape gene activation from inactive sex chromosomes in post-meiotic spermatids. Kcr accumulates at transcriptional start sites of sex-linked genes activated in an RNF8-dependent manner, and a chromatin conformational change is associated with RNF8-dependent epigenetic programming. Furthermore, we demonstrate that this RNF8-dependent pathway is distinct from that which recognizes DNA double-strand breaks. Our results establish a novel connection between a DNA damage response factor (RNF8) and epigenetic programming, specifically in establishing active epigenetic modifications and gene activation.

Indexed as

EpigenomicsMeiosisTranscriptional ActivationAnimalsCell Line, TumorHistonesHumansMaleNucleic Acid ConformationProtaminesSex ChromosomesSpermatidsSpermatocytesUbiquitinationUbiquitin-Protein LigasesX Chromosome InactivationHistonesProtaminesRnf8 protein, mouseUbiquitin-Protein Ligases

Identifiers

PMID23249736
PMCPMC3533078
OpenAlexW2104039146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.