Evidence map›Paper›PMID 23246429›Full record

ArticleTrends in cell biology2013

The role of Nup98 in transcription regulation in healthy and diseased cells.

Tobias M Franks, Martin W Hetzer

Open access · greenAbstract read
In one paragraph

Article in Trends in cell biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
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  14. Review
  15. Nucleoporins in cardiovascular disease.Journal of molecular and cellular cardiology · 2020
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Proteomics of phosphorylation and protein dynamics during fertilization and meiotic exit in theProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Tobias M FranksSalk Institute for Biological Studies, Molecular and Cellular Biology Laboratory, La Jolla, CA, USA.
Martin W Hetzer
Salk Institute for Biological Studies · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
The role of the nucleoporin Nup98 in gene regulationR01GM098749 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI HETZER, MARTIN W · 2012 to 2015
$1.4M
NCI NIH HHS P30 CA014195NCI NIH HHS P30CA014195NIGMS NIH HHS R01 GM098749NIGMS NIH HHS R01GM098749
6 · The paper itself

Abstract

Nuclear pore complex (NPC) proteins are known for their critical roles in regulating nucleocytoplasmic traffic of macromolecules across the nuclear envelope. However, recent findings suggest that some nucleoporins (Nups), including Nup98, have additional functions in developmental gene regulation. Nup98, which exhibits transcription-dependent mobility at the NPC but can also bind chromatin away from the nuclear envelope, is frequently involved in chromosomal translocations in a subset of patients suffering from acute myeloid leukemia (AML). A common paradigm suggests that Nup98 translocations cause aberrant transcription when they are recuited to aberrant genomic loci. Importantly, this model fails to account for the potential loss of wild type (WT) Nup98 function in the presence of Nup98 translocation mutants. Here we examine how the cell might regulate Nup98 nucleoplasmic protein levels to control transcription in healthy cells. In addition, we discuss the possibility that dominant negative Nup98 fusion proteins disrupt the transcriptional activity of WT Nup98 in the nucleoplasm to drive AML.

Indexed as

Gene Expression Regulation, NeoplasticActive Transport, Cell NucleusAnimalsCell Transformation, NeoplasticChromatinGene Expression Regulation, DevelopmentalHumansLeukemia, Myeloid, AcuteNuclear PoreNuclear Pore Complex ProteinsOncogene Proteins, FusionSignal TransductionTranscription, GeneticTranslocation, GeneticChromatinnuclear pore complex protein 96Nuclear Pore Complex ProteinsNup98 protein, humanOncogene Proteins, Fusion

Identifiers

PMID23246429
PMCPMC3622213
OpenAlexW2089814375

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.