Evidence map›Paper›PMID 23245616›Full record

ArticleFungal biology2012

Hypopulvins, novel peptaibiotics from the polyporicolous fungus Hypocrea pulvinata, are produced during infection of its natural hosts.

Christian René Röhrich, Anita Iversen, Walter Michael Jaklitsch, Hermann Voglmayr, Albrecht Berg, Heinrich Dörfelt, Ulf Thrane, Andreas Vilcinskas, Kristian Fog Nielsen, Hans Von Döhren and 2 more

Open access · greenAbstract read
In one paragraph

Article in Fungal biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  3. Article
  4. New 19-Residue Peptaibols fromMicroorganisms · 2018
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 4 countries.

Christian René Röhrich *Fraunhofer Institute for Molecular Biology and Applied Ecology (IME), Bioresources Project Group, Winchesterstraße 2, 35394 Gießen, Germany.
Anita Iversen *Department of Systems Biology, Center for Microbial Biotechnology, Technical University of Denmark, Søltofts Plads, Building 221, 2800 Kgs. Lyngby, Denmark.
Walter Michael JaklitschDepartment of Systematic and Evolutionary Botany, Faculty Centre of Biodiversity, University of Vienna, Rennweg 14, 1030 Vienna, Austria.
Hermann VoglmayrDepartment of Systematic and Evolutionary Botany, Faculty Centre of Biodiversity, University of Vienna, Rennweg 14, 1030 Vienna, Austria.
Albrecht BergDepartment of Biomaterials, Innovent e.V., Prüssingstraße 27 B, 07745 Jena, Germany.
Heinrich DörfeltDepartment of Microbial Communication, Institute of Microbiology, Friedrich Schiller University, Neugasse 25, 07743 Jena, Germany.
Ulf ThraneDepartment of Systems Biology, Center for Microbial Biotechnology, Technical University of Denmark, Søltofts Plads, Building 221, 2800 Kgs. Lyngby, Denmark.
Andreas VilcinskasFraunhofer Institute for Molecular Biology and Applied Ecology (IME), Bioresources Project Group, Winchesterstraße 2, 35394 Gießen, Germany.
Kristian Fog NielsenDepartment of Systems Biology, Center for Microbial Biotechnology, Technical University of Denmark, Søltofts Plads, Building 221, 2800 Kgs. Lyngby, Denmark.
Hans Von DöhrenBiochemistry and Molecular Biology, Institute of Chemistry, Technical University of Berlin, Franklinstraße 29, 10587 Berlin, Germany.
Hans BrücknerDepartment of Food Sciences, IFZ, Justus-Liebig University Gießen, 35392 Gießen, Germany.
Thomas DegenkolbDepartment of Systems Biology, Center for Microbial Biotechnology, Technical University of Denmark, Søltofts Plads, Building 221, 2800 Kgs. Lyngby, Denmark.
Technical University of Denmark · DKUniversity of Giessen · DEUniversity of Vienna · ATFraunhofer Institute for Molecular Biology and Applied Ecology · DEFriedrich Schiller University Jena · DEInnovent · DETechnische Universität Berlin · DE

Funding

Austrian Science Fund FWF P 22081
6 · The paper itself

Abstract

In order to investigate the significance of antibiotics for the producing organism(s) in the natural habitat, we screened specimens of the polyporicolous fungus Hypocrea pulvinata growing on its natural hosts Piptoporus betulinus and Fomitopsis pinicola. Results showed that a particular group of nonribosomally biosynthesised antibiotic polypeptides, the peptaibiotics, which contain the nonproteinogenic marker amino acid α-aminoisobutyric acid (Aib), was produced in the natural habitat by the fungicolous producer and, consequently, released into the host. Using liquid chromatography coupled to electrospray high-resolution mass spectrometry we detected especially 19-, but also 11-, 18-, and 20-residue peptaibiotics in the five infected specimens analysed. Structures of peptaibiotics found were confirmed by analysing the peptaibiome of pure agar cultures obtained by single-ascospore isolation from the specimens. The 19-residue peptaibols were determined as deletion sequences of the trichosporins B lacking the Aib residue in position 6. Notably, 26 of the 28 peptaibiotics sequenced were novel; therefore the name 'hypopulvins' was introduced. Considering not only the ubiquity of both the two host species but also the highly specific association between H. pulvinata and P. betulinus/F. pinicola, and the abundance of this fungicolous species in north temperate regions of the world, a decisive role for the peptaibiotics detected in this study is predicted, which may act as mediators of the complex interactions between the basidiomycetous host and its fungicolous ascomycete 'partner'. Structural analogies of the hypopulvins, particularly with other 18-, 19-, and 20-residue peptaibiotics, suggest that the hypopulvins are forming transmembrane ion channels and could thus support the hypothesis of a parasitic lifestyle of the fungicolous producer.

Indexed as

AntibiosisAnti-Infective AgentsChromatography, LiquidCoriolaceaeHypocreaMass SpectrometryPeptidesAnti-Infective AgentsPeptides

Identifiers

PMID23245616
PMCPMC4886835
OpenAlexW2016214676

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.