Evidence map›Paper›PMID 23245327›Full record

ArticleCell host & microbe2012

A tetracycline-repressible transactivator system to study essential genes in malaria parasites.

Paco Pino, Sarah Sebastian, Eunbin Arin Kim, Erin Bush, Mathieu Brochet, Katrin Volkmann, Elyse Kozlowski, Manuel Llinás, Oliver Billker, Dominique Soldati-Favre

Open access · hybridAbstract read
In one paragraph

Article in Cell host & microbe, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
  2. Article
  3. Ternary structure of Plasmodium vivaxN-myristoyltransferase with myristoyl-CoA and inhibitor IMP-0001173.Acta crystallographica. Section F, Structural biology communications · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Dominique Soldati-Favre: BringingFrontiers in cellular and infection microbiology · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. ApiAP2 Transcription Factors in Apicomplexan Parasites.Pathogens (Basel, Switzerland) · 2019
    Review
  19. Structural Insights Into KeyFrontiers in microbiology · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Paco PinoDepartment of Microbiology and Molecular Medicine, CMU, University of Geneva, 1 Rue Michel-Servet, 1211 Geneva 4, Switzerland.
Sarah Sebastian
Eunbin Arin Kim
Erin Bush
Mathieu Brochet
Katrin Volkmann
Elyse Kozlowski
Manuel Llinás
Oliver Billker
Dominique Soldati-Favre
Princeton University · USUniversity of Geneva · CH

Funding

Spatial Patterning During DevelopmentP50GM071508 · NIGMS · PRINCETON UNIVERSITY · PI POWELL, SUSAN M · 2004 to 2013
$30.6M
Regulation of Plasmodium falciparum transcriptionR01AI076276 · NIAID · PRINCETON UNIVERSITY · PI LLINAS, MANUEL · 2009 to 2013
$1.8M
Howard Hughes Medical InstituteMedical Research Council G0501670NIAID NIH HHS R01 AI076276NIGMS NIH HHS P50 GM071508NIGMS NIH HHS P50GM071508Wellcome Trust WT077502MAWellcome Trust WT098051
6 · The paper itself

Abstract

A major obstacle in analyzing gene function in apicomplexan parasites is the absence of a practical regulatable expression system. Here, we identified functional transcriptional activation domains within Apicomplexan AP2 (ApiAP2) family transcription factors. These ApiAP2 transactivation domains were validated in blood-, liver-, and mosquito-stage parasites and used to create a robust conditional expression system for stage-specific, tetracycline-dependent gene regulation in Toxoplasma gondii, Plasmodium berghei, and Plasmodium falciparum. To demonstrate the utility of this system, we created conditional knockdowns of two essential P. berghei genes: profilin (PRF), a protein implicated in parasite invasion, and N-myristoyltransferase (NMT), which catalyzes protein acylation. Tetracycline-induced repression of PRF and NMT expression resulted in a dramatic reduction in parasite viability. This efficient regulatable system will allow for the functional characterization of essential proteins that are found in these important parasites.

Indexed as

Gene Expression RegulationGenes, EssentialGenes, ProtozoanGenetics, MicrobialMolecular BiologyPlasmodium bergheiPlasmodium falciparumTetracyclineToxoplasmaTrans-ActivatorsTetracyclineTrans-Activators

Identifiers

PMID23245327
PMCPMC3712325
OpenAlexW2093690721

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.