Evidence map›Paper›PMID 23245209›Full record

ReviewHuman genomics2012

Gene family matters: expanding the HGNC resource.

Louise C Daugherty, Ruth L Seal, Mathew W Wright, Elspeth A Bruford

Abstract readReview
In one paragraph

Review in Human genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. CCIDB: a manually curated cell-cell interaction database with cell context information.Database : the journal of biological databases and curation · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. GFDP: the gene family database in poplar.Database : the journal of biological databases and curation · 2018
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Genenames.org: the HGNC resources in 2013.Nucleic acids research · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Louise C Daugherty
Ruth L Seal
Mathew W Wright
Elspeth A Bruford

Funding

The Nomenclature of Human GenesP41HG003345 · NHGRI · UNIVERSITY COLLEGE LONDON · PI BIRNEY, EWAN · 2004 to 2012
$3.4M
NHGRI NIH HHS P41 HG003345NHGRI NIH HHS P41 HG03345Wellcome Trust 081979/Z/07/Z
6 · The paper itself

Abstract

The HUGO Gene Nomenclature Committee (HGNC) assigns approved gene symbols to human loci. There are currently over 33,000 approved gene symbols, the majority of which represent protein-coding genes, but we also name other locus types such as non-coding RNAs, pseudogenes and phenotypic loci. Where relevant, the HGNC organise these genes into gene families and groups. The HGNC website http://www.genenames.org/ is an online repository of HGNC-approved gene nomenclature and associated resources for human genes, and includes links to genomic, proteomic and phenotypic information. In addition to this, we also have dedicated gene family web pages and are currently expanding and generating more of these pages using data curated by the HGNC and from information derived from external resources that focus on particular gene families. Here, we review our current online resources with a particular focus on our gene family data, using it to highlight our new Gene Symbol Report and gene family data downloads.

Indexed as

Databases, GeneticTerminology as TopicGenetic LociGenetic VariationGenomicsHumansMultigene FamilyProteinsProteomicsWeb BrowserProteins

Identifiers

PMID23245209
PMCPMC3437568

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.