Evidence map›Paper›PMID 23243002›Full record

ArticleMolecular biology of the cell2013

RNA polymerase II progression through H3K27me3-enriched gene bodies requires JMJD3 histone demethylase.

Conchi Estarás, Raquel Fueyo, Naiara Akizu, Sergi Beltrán, Marian A Martínez-Balbás

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. JMJD family proteins in cancer and inflammation.Signal transduction and targeted therapy · 2022
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Jumonji domain containing-3 (JMJD3) inhibition attenuates IL-1β-induced chondrocytes damage in vitro and protects osteoarthritis cartilage in vivo.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2020
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Conchi EstarásDepartment of Molecular Genomics, Instituto de Biología Molecular de Barcelona, Consejo Superior de Investigaciones Científicas, 08028 Barcelona, Spain.
Raquel Fueyo
Naiara Akizu
Sergi Beltrán
Marian A Martínez-Balbás
Consejo Superior de Investigaciones Científicas · ESUniversitat de Barcelona · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

JMJD3 H3K27me3 demethylase plays an important role in the transcriptional response to different signaling pathways; however, the mechanism by which it facilitates transcription has been unclear. Here we show that JMJD3 regulates transcription of transforming growth factor β (TGFβ)-responsive genes by promoting RNA polymerase II (RNAPII) progression along the gene bodies. Using chromatin immunoprecipitation followed by sequencing experiments, we show that, upon TGFβ treatment, JMJD3 and elongating RNAPII colocalize extensively along the intragenic regions of TGFβ target genes. According to these data, genome-wide analysis shows that JMJD3-dependent TGFβ target genes are enriched in H3K27me3 before TGFβ signaling pathway activation. Further molecular analyses demonstrate that JMJD3 demethylates H3K27me3 along the gene bodies, paving the way for the RNAPII progression. Overall these findings uncover the mechanism by which JMJD3 facilitates transcriptional activation.

Indexed as

Protein Processing, Post-TranslationalTranscription, GeneticAnimalsBasic Helix-Loop-Helix ProteinsChromatin ImmunoprecipitationCyclin-Dependent Kinase 9GenomeHEK293 CellsHistonesHumansJumonji Domain-Containing Histone DemethylasesMethylationMiceNerve Tissue ProteinsNeural Stem CellsPhosphorylationBasic Helix-Loop-Helix ProteinsCdk9 protein, mouseCyclin-Dependent Kinase 9HistonesJumonji Domain-Containing Histone DemethylasesKdm6b protein, mouseNerve Tissue ProteinsNeurog2 protein, mouseRNA Polymerase IISmad3 ProteinSmad3 protein, mouseTransforming Growth Factor beta

Identifiers

PMID23243002
PMCPMC3564542
OpenAlexW2171189444

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.