Evidence map›Paper›PMID 23242998›Full record

ArticleMolecular biology of the cell2013

Yeast G-proteins mediate directional sensing and polarization behaviors in response to changes in pheromone gradient direction.

Travis I Moore, Hiromasa Tanaka, Hyung Joon Kim, Noo Li Jeon, Tau-Mu Yi

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Travis I MooreDepartment of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA.
Hiromasa Tanaka
Hyung Joon Kim
Noo Li Jeon
Tau-Mu Yi
University of California, Irvine · USSeoul National University · KR

Funding

Uncover Strategies Used By Biological SystemsP50GM076516 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI LANDER, ARTHUR D · 2007 to 2016
$25.1M
Hand-held confocal line-scanner for intrasurgical useR44CA093106 · NCI · LUCID, INC. · PI EASTMAN, JAY M · 2003 to 2005
$2.2M
Training Program in Systems Biology of DevelopmentT32HD060555 · NICHD · UNIVERSITY OF CALIFORNIA-IRVINE · PI LANDER, ARTHUR D · 2009 to 2013
$1.3M
Specificity and Spatial Dynamics of Cell Signaling: The*R01GM075309 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI NIE, QING · 2005 to 2008
$1.1M
Hand-held confocal microscope for clinical/surgical useR43CA093106 · NCI · LUCID TECHNOLOGIES, INC. · PI RAJADHYAKSHA, MILIND · 2001 to 2001
$100k
NCI NIH HHS R43 CA093106NCI NIH HHS R44 CA093106NICHD NIH HHS HD060555-01NICHD NIH HHS T32 HD060555NIGMS NIH HHS P50 GM076516NIGMS NIH HHS P50GM76516NIGMS NIH HHS R01 GM075309NIGMS NIH HHS R01GM75309
6 · The paper itself

Abstract

Yeast cells polarize by projecting up mating pheromone gradients, a classic cell polarity behavior. However, these chemical gradients may shift direction. We examine how yeast cells sense and respond to a 180(o) switch in the direction of microfluidically generated pheromone gradients. We identify two behaviors: at low concentrations of α-factor, the initial projection grows by bending, whereas at high concentrations, cells form a second projection toward the new source. Mutations that increase heterotrimeric G-protein activity expand the bending-growth morphology to high concentrations; mutations that increase Cdc42 activity result in second projections at low concentrations. Gradient-sensing projection bending requires interaction between Gβγ and Cdc24, whereas gradient-nonsensing projection extension is stimulated by Bem1 and hyperactivated Cdc42. Of interest, a mutation in Gα affects both bending and extension. Finally, we find a genetic perturbation that exhibits both behaviors. Overexpression of the formin Bni1, a component of the polarisome, makes both bending-growth projections and second projections at low and high α-factor concentrations, suggesting a role for Bni1 downstream of the heterotrimeric G-protein and Cdc42 during gradient sensing and response. Thus we demonstrate that G-proteins modulate in a ligand-dependent manner two fundamental cell-polarity behaviors in response to gradient directional change.

Indexed as

Gene Expression Regulation, FungalAdaptor Proteins, Signal Transducingcdc42 GTP-Binding Protein, Saccharomyces cerevisiaeCell Cycle ProteinsCell PolarityChemotaxisGuanine Nucleotide Exchange FactorsMating FactorMicrofilament ProteinsMicrofluidicsMutationPeptidesPheromonesProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdaptor Proteins, Signal TransducingBEM1 protein, S cerevisiaeBni1 protein, S cerevisiaeCDC24 protein, S cerevisiaecdc42 GTP-Binding Protein, Saccharomyces cerevisiaeCell Cycle ProteinsGuanine Nucleotide Exchange FactorsMating FactorMicrofilament ProteinsPeptidesPheromonesSaccharomyces cerevisiae Proteins

Identifiers

PMID23242998
PMCPMC3571874
OpenAlexW1964444128

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.