Evidence map›Paper›PMID 23242997›Full record

ArticleMolecular biology of the cell2013

Structurally unique interaction of RBD-like and PH domains is crucial for yeast pheromone signaling.

Volodymyr Yerko, Traian Sulea, Irena Ekiel, Doreen Harcus, Jason Baardsnes, Miroslaw Cygler, Malcolm Whiteway, Cunle Wu

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Volodymyr YerkoLife Sciences, National Research Council, Montreal, QC, Canada.
Traian Sulea
Irena Ekiel
Doreen Harcus
Jason Baardsnes
Miroslaw Cygler
Malcolm Whiteway
Cunle Wu
National Research Council Canada · CARoyal Victoria Hospital · CA

Funding

CIHR 42516-4CIHR GSP-48370
6 · The paper itself

Abstract

The Ste5 protein forms a scaffold that associates and regulates the components of the mitogen-activated protein (MAP) kinase cascade that controls mating-pheromone-mediated signaling in the yeast Saccharomyces cerevisiae. Although it is known that the MEK kinase of the pathway, Ste11, associates with Ste5, details of this interaction have not been established. We identified a Ras-binding-domain-like (RBL) region in the Ste11 protein that is required specifically for the kinase to function in the mating pathway. This module is structurally related to domains in other proteins that mediate Ras-MAP kinase kinase kinase associations; however, this RBL module does not interact with Ras, but instead binds the PH domain of the Ste5 scaffold. Structural and functional studies suggest that the key role of this PH domain is to mediate the Ste5-Ste11 interaction. Overall these two evolutionarily conserved modules interact with each other through a unique interface, and thus in the pheromone pathway the structural context of the RBL domain contribution to kinase activation has been shifted through a change of its interaction partner from Ras to a PH domain.

Indexed as

Signal TransductionAdaptor Proteins, Signal TransducingAmino Acid SubstitutionBinding SitesGenes, Mating Type, FungalMAP Kinase Kinase KinasesModels, MolecularMutagenesis, Site-DirectedPeptide MappingPheromonesProtein BindingProtein Interaction Domains and MotifsProtein Structure, SecondaryProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdaptor Proteins, Signal TransducingMAP Kinase Kinase KinasesPheromonesSaccharomyces cerevisiae ProteinsSte11 protein, S cerevisiaeSTE5 protein, S cerevisiae

Identifiers

PMID23242997
PMCPMC3564526
OpenAlexW2333871510

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.