Evidence map›Paper›PMID 23242802›Full record

ArticleMicrobiology (Reading, England)2013

Arginine deiminase inhibits Porphyromonas gingivalis surface attachment.

Carla Cugini, Danielle N Stephens, Daniel Nguyen, Alpdogan Kantarci, Mary E Davey

Abstract read
In one paragraph

Article in Microbiology (Reading, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
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  8. Review
  9. Article
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  12. Article
  13. Genes Contributing toFrontiers in cellular and infection microbiology · 2017
    Article
  14. New approaches to combatJournal of oral microbiology · 2017
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Carla CuginiDepartment of Oral Medicine Infection and Immunity, Harvard School of Dental Medicine, Boston, MA, USA.
Danielle N StephensDepartment of Periodontology, The Forsyth Institute, Cambridge, MA, USA.
Daniel NguyenDepartment of Periodontology, The Forsyth Institute, Cambridge, MA, USA.
Alpdogan KantarciDepartment of Periodontology, The Forsyth Institute, Cambridge, MA, USA.
Mary E DaveyDepartment of Oral Medicine Infection and Immunity, Harvard School of Dental Medicine, Boston, MA, USA.
Harvard University · US

Funding

Regulatory Mechanisms Controlling Expression of P. gingivalis Surface StructuresR01DE019117 · NIDCR · UNIVERSITY OF FLORIDA · PI DAVEY, MARY ELLEN · 2009 to 2019
$4.5M
Hypoxia and PMN Function in PeriodontitisR21DE020906 · NIDCR · ADA FORSYTH INSTITUTE, INC. · PI KANTARCI, IBRAHIM ALPDOGAN · 2011 to 2012
$478k
Inhibition of P. gingivalis Biofilm Formation by a Streptococcal Effector ProteinF32DE022484 · NIDCR · ADA FORSYTH INSTITUTE, INC. · PI CUGINI, CARLA · 2012 to 2013
$104k
NIDCR NIH HHS DE019117NIDCR NIH HHS DE022484NIDCR NIH HHS DE20906NIDCR NIH HHS F32 DE022484NIDCR NIH HHS R01 DE019117NIDCR NIH HHS R21 DE020906
6 · The paper itself

Abstract

The oral cavity is host to a complex microbial community whose maintenance depends on an array of cell-to-cell interactions and communication networks, with little known regarding the nature of the signals or mechanisms by which they are sensed and transmitted. Determining the signals that control attachment, biofilm development and outgrowth of oral pathogens is fundamental to understanding pathogenic biofilm development. We have previously identified a secreted arginine deiminase (ADI) produced by Streptococcus intermedius that inhibited biofilm development of the commensal pathogen Porphyromonas gingivalis through downregulation of genes encoding the major (fimA) and minor (mfa1) fimbriae, both of which are required for proper biofilm development. Here we report that this inhibitory effect is dependent on enzymic activity. We have successfully cloned, expressed and defined the conditions to ensure that ADI from S. intermedius is enzymically active. Along with the cloning of the wild-type allele, we have created a catalytic mutant (ADIC399S), in which the resulting protein is not able to catalyse the hydrolysis of l-arginine to l-citrulline. P. gingivalis is insensitive to the ADIC399S catalytic mutant, demonstrating that enzymic activity is required for the effects of ADI on biofilm formation. Biofilm formation is absent under l-arginine-deplete conditions, and can be recovered by the addition of the amino acid. Taken together, the results indicate that arginine is an important signal that directs biofilm formation by this anaerobe. Based on our findings, we postulate that ADI functions to reduce arginine levels and, by a yet to be identified mechanism, signals P. gingivalis to alter biofilm development. ADI release from the streptococcal cell and its cross-genera effects are important findings in understanding the nature of inter-bacterial signalling and biofilm-mediated diseases of the oral cavity.

Indexed as

Microbial InteractionsArginineBacterial AdhesionBiofilmsDNA, BacterialHydrolasesMolecular Sequence DataPorphyromonas gingivalisSequence Analysis, DNAStreptococcus intermediusArgininearginine deiminaseDNA, BacterialHydrolases

Identifiers

PMID23242802
PMCPMC3709564
OpenAlexW2118673074

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.