Evidence map›Paper›PMID 23242368›Full record

ArticleNature genetics2013

Genetic variants in STAT4 and HLA-DQ genes confer risk of hepatitis B virus-related hepatocellular carcinoma.

De-Ke Jiang, Jielin Sun, Guangwen Cao, Yao Liu, Dongxin Lin, Yu-Zhen Gao, Wei-Hua Ren, Xi-Dai Long, Hongxing Zhang, Xiao-Pin Ma and 54 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 158 papers, 12 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
158citing papers in PubMed, 12 pooled it
18.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

158 citing papers in PubMed, 12 syntheses or guidelines pooled it, 318 citations in OpenAlex.

  1. Pooled it
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  7. Genetic polymorphisms of the multidrug resistance 1 gene MDR1 and the risk of hepatocellular carcinoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Pooled it
  8. Association between KIF1B rs17401966 polymorphism and hepatocellular carcinoma risk: a meta-analysis involving 17,210 subjects.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  9. Pooled it
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  11. DNA repair gene XRCC3 Thr241Met polymorphism and hepatocellular carcinoma risk.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2013
    Pooled it
  12. Pooled it
  13. Trial
  14. Article
  15. Article
  16. Article
  17. Review
  18. [Key epidemiological data and recommended prevention and control measures for primary liver cancer].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2026
    Review
  19. Article
  20. HLA-DQB1*03:01 and risk of HBV-related HCC.Hepatology (Baltimore, Md.) · 2026
    Article

98 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

64 authors at 20 institutions in 2 countries.

De-Ke JiangState Key Laboratory of Genetic Engineering, Institute of Genetics, School of Life Sciences, Fudan University, Shanghai, China.
Jielin Sun
Guangwen Cao
Yao Liu
Dongxin Lin
Yu-Zhen Gao
Wei-Hua Ren
Xi-Dai Long
Hongxing Zhang
Xiao-Pin Ma
Zhong Wang
Wei Jiang
Tao-Yang Chen
Yong Gao
Liang-Dan Sun
Ji-Rong Long
Hui-Xing Huang
Dan Wang
Hongjie Yu
Pengyin Zhang
Li-Sha Tang
Bo Peng
Hao Cai
Ting-Ting Liu
Ping Zhou
Fang Liu
Xiaoling Lin
Sha Tao
Bo Wan
He-Xi Ge Sai-Yin
Lun-Xiu Qin
Jianhua Yin
Li Liu
Chen Wu
Yan Pei
Yuan-Feng Zhou
Yun Zhai
Pei-Xin Lu
Aihua Tan
Xian-Bo Zuo
Jia Fan
Jiang Chang
Xiaoli Gu
Neng-Jin Wang
Yang Li
Yin-Kun Liu
Kan Zhai
Hongwei Zhang
Zhibin Hu
Jun Liu
Qing Yi
Yongbing Xiang
Rong Shi
Qiang Ding
Wei Zheng
Xiao-Ou Shu
Zengnan Mo
Yin Yao Shugart
Xue-Jun Zhang
Gangqiao Zhou
Hongbing Shen
S Lilly Zheng
Jianfeng Xu
Long Yu
Fudan University · CNState Key Laboratory of Genetic EngineeringBeijing Proteome Research Center · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNWake Forest University · USGuangxi Medical University · CNMinistry of Education of the People's Republic of China · CNQidong Liver Cancer Prevention Research · CNSecond Military Medical University · CNVanderbilt University · USHuashan Hospital · CNNanjing Medical University · CNThe First Affiliated Hospital, Sun Yat-sen University · CNYoujiang Medical College for Nationalities · CNAnhui Medical University · CNFirst Affiliated Hospital of GuangXi Medical University · CNFirst Affiliated Hospital of Henan University of Science and Technology · CNNantong Tumor Hospital · CNNational Institute of Mental Health · USShanghai Cancer Institute · CN

Funding

Cohort Study of Cancer inhibitory Factors in MenR01CA082729 · NCI · VANDERBILT UNIVERSITY · PI SHU, XIAO-OU · 2001 to 2011
$6.3M
Shanghai Men's Health StudyUM1CA173640 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SHU, XIAO-OU · 2013 to 2017
$4.9M
Cancer Risk Reduction and Diet: A Cohort Study of WomenR37CA070867 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ZHENG, WEI · 2009 to 2013
$4.7M
NCI NIH HHS R01 CA082729NCI NIH HHS R37 CA070867NCI NIH HHS UM1 CA173640
6 · The paper itself

Abstract

To identify genetic susceptibility loci for hepatitis B virus (HBV)-related hepatocellular carcinoma (HCC) in the Chinese population, we carried out a genome-wide association study (GWAS) in 2,514 chronic HBV carriers (1,161 HCC cases and 1,353 controls) followed by a 2-stage validation among 6 independent populations of chronic HBV carriers (4,319 cases and 4,966 controls). The joint analyses showed that HCC risk was significantly associated with two independent loci: rs7574865 at STAT4, P(meta) = 2.48 × 10(-10), odds ratio (OR) = 1.21; and rs9275319 at HLA-DQ, P(meta) = 2.72 × 10(-17), OR = 1.49. The risk allele G at rs7574865 was significantly associated with lower mRNA levels of STAT4 in both the HCC tissues and nontumor tissues of 155 individuals with HBV-related HCC (P(trend) = 0.0008 and 0.0002, respectively). We also found significantly lower mRNA expression of STAT4 in HCC tumor tissues compared with paired adjacent nontumor tissues (P = 2.33 × 10(-14)).

Indexed as

Carcinoma, HepatocellularGene ExpressionGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHepatitis BHepatitis B virusHLA-DQ AntigensHumansLiver NeoplasmsPolymorphism, Single NucleotideSTAT4 Transcription FactorHLA-DQ AntigensSTAT4 Transcription Factor

Identifiers

PMID23242368
PMCPMC4105840
OpenAlexW2015804728

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.