Evidence map›Paper›PMID 23241354›Full record

ArticleChemical biology & drug design2013

Biomolecular Interactions of small-molecule inhibitors affecting the YopH protein tyrosine phosphatase.

Megan Hogan, Medhanit Bahta, Scott Cherry, George T Lountos, Joseph E Tropea, Bryan M Zhao, Terrence R Burke, David S Waugh, Robert G Ulrich

Open access · greenAbstract read
In one paragraph

Article in Chemical biology & drug design, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Megan HoganUnited States Army Medical Research Institute of Infectious Diseases, Frederick, MD 21702, USA.
Medhanit Bahta
Scott Cherry
George T Lountos
Joseph E Tropea
Bryan M Zhao
Terrence R Burke
David S Waugh
Robert G Ulrich
National Institutes of Health · USUnited States Army Medical Research Institute of Infectious Diseases · USNational Cancer Institute · USFrederick National Laboratory for Cancer Research · US

Funding

Inhibitors of Tyrosine Kinase-Dependent Signalling as Anti-Cancer AgentsZIABC006198 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BURKE, TERRENCE · 2009 to 2025
$13.7M
Protein Purification CoreZICBC011016 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TROPEA, JOSEPH · 2009 to 2021
$11.0M
Structural Proteomics of the Yersinia Yop VirulonZIABC010342 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WAUGH, DAVID S · 2009 to 2013
$1.5M
CCR NIH HHS HHSN261200800001CIntramural NIH HHSNCI NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

We have developed competitive and direct binding methods to examine small-molecule inhibitors of protein tyrosine phosphatase activity. Focusing on the Yersinia pestis outer protein H, a potent bacterial protein tyrosine phosphatase, we describe how an understanding of the kinetic interactions involving Yersinia pestis outer protein H, peptide substrates, and small-molecule inhibitors of protein tyrosine phosphatase activity can be beneficial for inhibitor screening, and we further translate these results into a microarray assay for high-throughput screening.

Indexed as

Bacterial Outer Membrane ProteinsEnzymes, ImmobilizedErbB ReceptorsHigh-Throughput Screening AssaysKineticsPhosphopeptidesProtein Array AnalysisProtein BindingProtein Tyrosine PhosphatasesSmall Molecule LibrariesSubstrate SpecificityYersinia pestisBacterial Outer Membrane ProteinsEnzymes, ImmobilizedErbB ReceptorsPhosphopeptidesProtein Tyrosine PhosphatasesSmall Molecule LibrariesyopH protein, Yersinia

Identifiers

PMID23241354
PMCPMC3573263
OpenAlexW1604975052

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.