Evidence map›Paper›PMID 23240039›Full record

ArticlePloS one2012

Evolutionarily conserved histone methylation dynamics during seed life-cycle transitions.

Kerstin Müller, Daniel Bouyer, Arp Schnittger, Allison R Kermode

Erratum issuedAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
  2. Article
  3. A Brief Overview of the Epigenetic Regulatory Mechanisms in Plants.International journal of molecular sciences · 2025
    Review
  4. Epigenetic responses of trees to environmental stress in the context of climate change.Biological reviews of the Cambridge Philosophical Society · 2025
    Review
  5. Epigenetic Mechanisms of Tree Responses to Climatic Changes.International journal of molecular sciences · 2022
    Review
  6. Review
  7. Review
  8. Article
  9. The Histone Chaperone HIRA Is a Positive Regulator of Seed Germination.International journal of molecular sciences · 2021
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. The function of histone lysine methylation related SET domain group proteins in plants.Protein science : a publication of the Protein Society · 2020
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

4 authors.

Kerstin MüllerBiological Sciences, Simon Fraser University, Burnaby, British Colombia, Canada. kermode@sfu.ca
Daniel Bouyer
Arp Schnittger
Allison R Kermode

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants have a remarkable ability to react to seasonal changes by synchronizing life-cycle transitions with environmental conditions. We addressed the question of how transcriptional re-programming occurs in response to an environmental cue that triggers the major life cycle transition from seed dormancy to germination and seedling growth. We elucidated an important mechanistic aspect of this process by following the chromatin dynamics of key regulatory genes with a focus on the two antagonistic marks, H3K4me3 and H3K27me3. Histone methylation patterns of major dormancy regulators changed during the transition to germination and seedling growth. We observed a switch from H3K4me3 and high transcription levels to silencing by the repressive H3K27me3 mark when dormancy was broken through exposure to moist chilling, underscoring that a functional PRC2 complex is necessary for this transition. Moreover, this reciprocal regulation by H3K4me3 and H3K27me3 is evolutionarily conserved from gymnosperms to angiosperms.

Indexed as

ArabidopsisHistonesPlant DormancySeedlingsSeedsArabidopsis ProteinsChromatinEvolution, MolecularGene-Environment InteractionGene Expression Regulation, PlantHistone-Lysine N-MethyltransferaseMethylationPolycomb Repressive Complex 2Repressor ProteinsSeasonsArabidopsis ProteinsChromatinHistone-Lysine N-MethyltransferaseHistonesPolycomb Repressive Complex 2PRC2 protein, ArabidopsisRepressor Proteins

Identifiers

PMID23240039
PMCPMC3519861

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.