ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2013
Development of a core set of single-locus SSR markers for allotetraploid rapeseed (Brassica napus L.).
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed.
- Article
- Development of genome-specific SSR markers for the identification of introgressed segments of3 Biotech · 2022Article
- Genomic survey sequencing, development and characterization of single- and multi-locus genomic SSR markers of Elymus sibiricus L.BMC plant biology · 2021Article
- Heterosis Derived From Nonadditive Effects of theFrontiers in plant science · 2021Article
- Root Morphological Traits of Seedlings Are Predictors of Seed Yield and Quality in Winter Oilseed Rape Hybrid Cultivars.Frontiers in plant science · 2020Article
- Quantitative Trait Locus Mapping and Identification of Candidate Genes Controlling Flowering Time inFrontiers in plant science · 2020Article
- Population structure, genetic diversity and downy mildew resistance among Ocimum species germplasm.BMC plant biology · 2018Article
- Analysis of genetic diversity of rapeseed genetic resources in Japan and core collection construction.Breeding science · 2017Article
- Brassica napus DS-3, encoding a DELLA protein, negatively regulates stem elongation through gibberellin signaling pathway.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Article
- Genetic Variation and Association Mapping of Seed-Related Traits in Cultivated Peanut (Frontiers in plant science · 2017Article
- Genomic survey sequencing for development and validation of single-locus SSR markers in peanut (Arachis hypogaea L.).BMC genomics · 2016Article
- Characterization and Transferable Utility of Microsatellite Markers in the Wild and Cultivated Arachis Species.PloS one · 2016Article
- Genome-wide mining, characterization, and development of microsatellite markers in gossypium species.Scientific reports · 2015Article
- The Natural Variation of Seed Weight Is Mainly Controlled by Maternal Genotype in Rapeseed (Brassica napus L.).PloS one · 2015Article
- Assessing and broadening genetic diversity of a rapeseed germplasm collection.Breeding science · 2014Article
- Genome-wide microsatellite characterization and marker development in the sequenced Brassica crop species.DNA research : an international journal for rapid publication of reports on genes and genomes · 2014Article
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16 authors.
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Abstract
Brassica napus (AACC) is a recent allotetraploid species evolved through hybridization between two diploids, B. rapa (AA) and B. oleracea (CC). Due to extensive genome duplication and homoeology within and between the A and C genomes of B. napus, most SSR markers display multiple fragments or loci, which limit their application in genetics and breeding studies of this economically important crop. In this study, we collected 3,890 SSR markers from previous studies and also developed 5,968 SSR markers from genomic sequences of B. rapa, B. oleracea and B. napus. Of these, 2,701 markers that produced single amplicons were putative single-locus markers in the B. napus genome. Finally, a set of 230 high-quality single-locus SSR markers were established and assigned to the 19 linkage groups of B. napus using a segregating population with 154 DH individuals. A subset of 78 selected single-locus SSR markers was proved to be highly stable and could successfully discriminate each of the 45 inbred lines and hybrids. In addition, most of the 230 SSR markers showed the single-locus nature in at least one of the Brassica species of the U's triangle besides B. napus. These results indicated that this set of single-locus SSR markers has a wide range of coverage with excellent stability and would be useful for gene tagging, sequence scaffold assignment, comparative mapping, diversity analysis, variety identification and association mapping in Brassica species.
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