Evidence map›Paper›PMID 23237851›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Diverse specificity and effector function among human antibodies to HIV-1 envelope glycoprotein epitopes exposed by CD4 binding.

Yongjun Guan, Marzena Pazgier, Mohammad M Sajadi, Roberta Kamin-Lewis, Salma Al-Darmarki, Robin Flinko, Elena Lovo, Xueji Wu, James E Robinson, Michael S Seaman and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 162 citations in OpenAlex.

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70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Yongjun GuanDivision of Basic Science and Vaccine Research, Institute of Human Virology, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Marzena Pazgier
Mohammad M Sajadi
Roberta Kamin-Lewis
Salma Al-Darmarki
Robin Flinko
Elena Lovo
Xueji Wu
James E Robinson
Michael S Seaman
Timothy R Fouts
Robert C Gallo
Anthony L DeVico
George K Lewis
Institut de Recherche Vaccinale · FRHarvard University · USProfectus Biosciences (United States) · USUniversity Medical Center New Orleans · USUniversity of Maryland, Baltimore · US

Funding

ZWITTERION SURFACTANT DDMAB FOR IMPROV STABIL OF PROTEINP41RR001209 · NCRR · STANFORD UNIVERSITY · PI GONZALEZ, ANA M · 1985 to 2011
$38.9M
Broadly Neutralizing Monoclonal Antibodies Against HIV-1R01AI087181 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI LEWIS, GEORGE K · 2010 to 2014
$2.7M
Broad Neutralizing Monoclonal Antibodies From HIV ControllersR01AI084830 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI LEWIS, GEORGE K · 2009 to 2010
$851k
The circulating and memory B-antibody responses in HIV-infected patientsK23AI084580 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI SAJADI, MOHAMMAD MOHSENI · 2010 to 2013
$539k
NCRR NIH HHS P41 RR001209NCRR NIH HHS P41RR001209NIAID NIH HHS K23 AI-084580NIAID NIH HHS K23 AI084580NIAID NIH HHS R01 AI-084830NIAID NIH HHS R01 AI084830NIAID NIH HHS R01 AI-087181NIAID NIH HHS R01 AI087181
6 · The paper itself

Abstract

The HIV-1 envelope glycoprotein (Env) undergoes conformational transitions consequent to CD4 binding and coreceptor engagement during viral entry. The physical steps in this process are becoming defined, but less is known about their significance as targets of antibodies potentially protective against HIV-1 infection. Here we probe the functional significance of transitional epitope exposure by characterizing 41 human mAbs specific for epitopes exposed on trimeric Env after CD4 engagement. These mAbs recognize three epitope clusters: cluster A, the gp120 face occluded by gp41 in trimeric Env; cluster B, a region proximal to the coreceptor-binding site (CoRBS) and involving the V1/V2 domain; and cluster C, the coreceptor-binding site. The mAbs were evaluated functionally by antibody-dependent, cell-mediated cytotoxicity (ADCC) and for neutralization of Tiers 1 and 2 pseudoviruses. All three clusters included mAbs mediating ADCC. However, there was a strong potency bias for cluster A, which harbors at least three potent ADCC epitopes whose cognate mAbs have electropositive paratopes. Cluster A epitopes are functional ADCC targets during viral entry in an assay format using virion-sensitized target cells. In contrast, only cluster C contained epitopes that were recognized by neutralizing mAbs. There was significant diversity in breadth and potency that correlated with epitope fine specificity. In contrast, ADCC potency had no relationship with neutralization potency or breadth for any epitope cluster. Thus, Fc-mediated effector function and neutralization coselect with specificity in anti-Env antibody responses, but the nature of selection is distinct for these two antiviral activities.

Indexed as

Models, MolecularAntibodies, MonoclonalAntibody-Dependent Cell CytotoxicityAntibody SpecificityBinding SitesCD4 AntigensCrystallography, X-RayEnzyme-Linked Immunosorbent AssayEpitopesHIV-1HIV AntibodiesHIV Envelope Protein gp120HumansNeutralization TestsProtein ConformationAntibodies, MonoclonalCD4 AntigensEpitopesHIV AntibodiesHIV Envelope Protein gp120

Identifiers

PMID23237851
PMCPMC3538257
OpenAlexW2020355483

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.