Evidence map›Paper›PMID 23236289›Full record

ArticlePLoS genetics2012

Recessive mutations in SPTBN2 implicate β-III spectrin in both cognitive and motor development.

Stefano Lise, Yvonne Clarkson, Emma Perkins, Alexandra Kwasniewska, Elham Sadighi Akha, Ricardo Parolin Schnekenberg, Daumante Suminaite, Jilly Hope, Ian Baker, Lorna Gregory and 22 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 114 citations in OpenAlex.

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  8. Kv3.3 Expression Enhanced by a Novel Variant in the Kozak Sequence ofInternational journal of molecular sciences · 2024
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  13. Mettl1-mediated internal mCell & bioscience · 2023
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  17. Review
  18. Ankyrin-R Links Kv3.3 to the Spectrin Cytoskeleton and Is Required for Purkinje Neuron Survival.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  19. Commentary:Frontiers in molecular neuroscience · 2022
    Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 7 institutions in 2 countries.

Stefano LiseWellcome Trust Centre for Human Genetics, University of Oxford, Oxford, United Kingdom.
Yvonne Clarkson
Emma Perkins
Alexandra Kwasniewska
Elham Sadighi Akha
Ricardo Parolin Schnekenberg
Daumante Suminaite
Jilly Hope
Ian Baker
Lorna Gregory
Angie Green
Chris Allan
Sarah Lamble
Sandeep Jayawant
Gerardine Quaghebeur
M Zameel Cader
Sarah Hughes
Richard J E Armstrong
Alexander Kanapin
Andrew Rimmer
Gerton Lunter
Iain Mathieson
Jean-Baptiste Cazier
David Buck
Jenny C Taylor
David Bentley
Gilean McVean
Peter Donnelly
Samantha J L Knight
Mandy Jackson
Jiannis Ragoussis
Andrea H Németh
Centre for Human Genetics · GBUniversity of Oxford · GBUniversity of Edinburgh · GBOxford BioMedica (United Kingdom) · GBOxford University Hospitals NHS Trust · GBIllumina (United Kingdom) · GBRoyal Berkshire NHS Foundation Trust · GB

Funding

Biotechnology and Biological Sciences Research Council BB/I02593X/1Medical Research Council G0900747Medical Research Council G0900747 91070Wellcome Trust 075491/Z/04Wellcome Trust 076113Wellcome Trust 085475Wellcome Trust 090532Wellcome Trust 090532/Z/09/ZWellcome Trust 093077
6 · The paper itself

Abstract

β-III spectrin is present in the brain and is known to be important in the function of the cerebellum. Heterozygous mutations in SPTBN2, the gene encoding β-III spectrin, cause Spinocerebellar Ataxia Type 5 (SCA5), an adult-onset, slowly progressive, autosomal-dominant pure cerebellar ataxia. SCA5 is sometimes known as "Lincoln ataxia," because the largest known family is descended from relatives of the United States President Abraham Lincoln. Using targeted capture and next-generation sequencing, we identified a homozygous stop codon in SPTBN2 in a consanguineous family in which childhood developmental ataxia co-segregates with cognitive impairment. The cognitive impairment could result from mutations in a second gene, but further analysis using whole-genome sequencing combined with SNP array analysis did not reveal any evidence of other mutations. We also examined a mouse knockout of β-III spectrin in which ataxia and progressive degeneration of cerebellar Purkinje cells has been previously reported and found morphological abnormalities in neurons from prefrontal cortex and deficits in object recognition tasks, consistent with the human cognitive phenotype. These data provide the first evidence that β-III spectrin plays an important role in cortical brain development and cognition, in addition to its function in the cerebellum; and we conclude that cognitive impairment is an integral part of this novel recessive ataxic syndrome, Spectrin-associated Autosomal Recessive Cerebellar Ataxia type 1 (SPARCA1). In addition, the identification of SPARCA1 and normal heterozygous carriers of the stop codon in SPTBN2 provides insights into the mechanism of molecular dominance in SCA5 and demonstrates that the cell-specific repertoire of spectrin subunits underlies a novel group of disorders, the neuronal spectrinopathies, which includes SCA5, SPARCA1, and a form of West syndrome.

Indexed as

CerebellumSpinocerebellar AtaxiasAdultAnimalsChromosome MappingCognition DisordersHumansMiceMice, KnockoutMutationNeuronsPurkinje CellsSpectrinSpectrinSPTBN2 protein, human

Identifiers

PMID23236289
PMCPMC3516553
OpenAlexW2165199196

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.