Evidence map›Paper›PMID 23236132›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice.

Xiaojun Zhang, Jianfei Wang, Ji Huang, Hongxia Lan, Cailin Wang, Congfei Yin, Yunyu Wu, Haijuan Tang, Qian Qian, Jiayang Li and 1 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 219 papers.

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0cells of the map it votes in
219citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

219 citing papers in PubMed.

  1. Article
  2. Common genetic control for grain filling duration and kernel weight in grain sorghum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. A novel QTLFrontiers in plant science · 2026
    Article
  7. Article
  8. Article
  9. Effects ofPlants (Basel, Switzerland) · 2025
    Article
  10. A Novel OsMPK6-OsMADS47-PPKL1/3 Module Controls Grain Shape and Yield in Rice.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Candidate gene analysis of rice grain shape based on genome-wide association study.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  17. Review
  18. Plants (Basel, Switzerland) · 2024
    Article
  19. Review
  20. Review

159 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xiaojun ZhangState Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China.
Jianfei Wang
Ji Huang
Hongxia Lan
Cailin Wang
Congfei Yin
Yunyu Wu
Haijuan Tang
Qian Qian
Jiayang Li
Hongsheng Zhang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Grain size and shape are important components determining rice grain yield, and they are controlled by quantitative trait loci (QTLs). Here, we report the cloning and functional characterization of a major grain length QTL, qGL3, which encodes a putative protein phosphatase with Kelch-like repeat domain (OsPPKL1). We found a rare allele qgl3 that leads to a long grain phenotype by an aspartate-to-glutamate transition in a conserved AVLDT motif of the second Kelch domain in OsPPKL1. The rice genome has other two OsPPKL1 homologs, OsPPKL2 and OsPPKL3. Transgenic studies showed that OsPPKL1 and OsPPKL3 function as negative regulators of grain length, whereas OsPPKL2 as a positive regulator. The Kelch domains are essential for the OsPPKL1 biological function. Field trials showed that the application of the qgl3 allele could significantly increase grain yield in both inbred and hybrid rice varieties, due to its favorable effect on grain length, filling, and weight.

Indexed as

AllelesAgricultureBase SequenceCloning, MolecularGenes, PlantHybridization, GeneticInbreedingOryzaPlant ProteinsPolymorphism, GeneticQuantitative Trait, HeritableQuantitative Trait LociReproducibility of ResultsSeedsSequence Homology, Amino AcidPlant Proteins

Identifiers

PMID23236132
PMCPMC3535600

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.