Evidence map›Paper›PMID 23235564›Full record

ArticleKidney international2013

Chromosome substitution modulates resistance to ischemia reperfusion injury in Brown Norway rats.

David P Basile, Melinda R Dwinell, Shur-Jen Wang, Brian D Shames, Deborah L Donohoe, Shaoying Chen, Rajasree Sreedharan, Scott K Van Why

Open access · greenAbstract read
In one paragraph

Article in Kidney international, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Role of actin cytoskeleton in podocytes.Pediatric nephrology (Berlin, Germany) · 2021
    Review
  5. Article
  6. Article
  7. Article
  8. Endothelial prostacyclin protects the kidney from ischemia-reperfusion injury.Pflugers Archiv : European journal of physiology · 2019
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

David P BasileDepartment of Cellular and Integrative Physiology, Indiana University School of Medicine, Indianapolis, Indiana 46202, USA. dpbasile@iupui.edu
Melinda R Dwinell
Shur-Jen Wang
Brian D Shames
Deborah L Donohoe
Shaoying Chen
Rajasree Sreedharan
Scott K Van Why
Medical College of Wisconsin · USChildren's Hospital of Wisconsin · USIndiana University School of Medicine

Funding

Long-term effects of acute renal failureR01DK063114 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI David P. Basile · 2003 to 2026
$8.1M
Integrative Biology of Childhood Kidney DiseaseP50DK079306 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI AVNER, ELLIS DAVID · 2007 to 2011
$5.1M
Relative Roles of HSP70 and HSP25 in the Modulation of Renal InjuryK08DK075470 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI SREEDHARAN, RAJASREE · 2006 to 2010
$665k
NIDDK NIH HHS K08 DK075470NIDDK NIH HHS KO8-DK075470NIDDK NIH HHS P50 DK079306NIDDK NIH HHS R01 DK 063114NIDDK NIH HHS R01 DK063114
6 · The paper itself

Abstract

Brown Norway rats (BN, BN/NHsdMcwi) are profoundly resistant to developing acute kidney injury (AKI) following ischemia reperfusion. To help define the genetic basis for this resistance, we used consomic rats, in which individual chromosomes from BN rats were placed into the genetic background of Dahl SS rats (SS, SS/JrHsdMcwi) to determine which chromosomes contain alleles contributing to protection from AKI. The parental strains had dramatically different sensitivity to ischemia reperfusion with plasma creatinine levels following 45 min of ischemia and 24 h reperfusion of 4.1 and 1.3 mg/dl in SS and BN, respectively. No consomic strain showed protection similar to the parental BN strain. Nine consomic strains (SS-7(BN), SS-X(BN), SS-8(BN), SS-4(BN), SS-15(BN), SS-3(BN), SS-10(BN), SS-6(BN), and SS-5(BN)) showed partial protection (plasma creatinine about 2.5-3.0 mg/dl), suggesting that multiple alleles contribute to the severity of AKI. In silico analysis was performed using disease ontology database terms and renal function quantitative trait loci from the Rat Genome Database on the BN chromosomes giving partial protection from AKI. This tactic identified at least 36 candidate genes, with several previously linked to the pathophysiology of AKI. Thus, natural variants of these alleles or yet-to-be identified alleles on these chromosomes provide protection against AKI. These alleles may be potential modulators of AKI in susceptible patient populations.

Indexed as

Genetic Predisposition to DiseaseAcute Kidney InjuryAnimalsChromosomes, MammalianCreatinineDNA-Binding ProteinsHeat Shock Transcription FactorsQuantitative Trait LociRatsRats, Inbred BNRats, Inbred DahlReperfusion InjuryTranscription FactorsCreatinineDNA-Binding ProteinsHeat Shock Transcription FactorsTranscription Factors

Identifiers

PMID23235564
PMCPMC3561482
OpenAlexW2018334986

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.