Evidence map›Paper›PMID 23235494›Full record

ArticleRNA biology2013

d(GGGT) 4 and r(GGGU) 4 are both HIV-1 inhibitors and interleukin-6 receptor aptamers.

Eileen Magbanua, Tijana Zivkovic, Björn Hansen, Niklas Beschorner, Cindy Meyer, Inken Lorenzen, Joachim Grötzinger, Joachim Hauber, Andrew E Torda, Günter Mayer and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Antiproliferative Effects of the Aptamer d(GGGT)International journal of molecular sciences · 2022
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Interaction of hemin with quadruplex DNA.Journal of biological physics · 2017
    Article
  18. Article
  19. G-Quadruplex Forming Oligonucleotides as Anti-HIV Agents.Molecules (Basel, Switzerland) · 2015
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 5 countries.

Eileen MagbanuaInstitute for Biochemistry and Molecular Biology, Chemistry Department, MIN-Faculty, Hamburg University, Hamburg, Germany.
Tijana Zivkovic
Björn Hansen
Niklas Beschorner
Cindy Meyer
Inken Lorenzen
Joachim Grötzinger
Joachim Hauber
Andrew E Torda
Günter Mayer
Stefan Rose-John
Ulrich Hahn
Faculty (United Kingdom) · GBInstitute of Bioinformatics · INLeibniz Institute of Virology (LIV) · DEMinistry of Culture · BRDivision of Chemistry · USUniversität Hamburg · DEUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aptamers are oligonucleotides that bind targets with high specificity and affinity. They have become important tools for biosensing, target detection, drug delivery and therapy. We selected the quadruplex-forming 16-mer DNA aptamer AID-1 [d(GGGT) 4] with affinity for the interleukin-6 receptor (IL-6R) and identified single nucleotide variants that showed no significant loss of binding ability. The RNA counterpart of AID-1 [r(GGGU) 4] also bound IL-6R as quadruplex structure. AID-1 is identical to the well-known HIV inhibitor T30923, which inhibits both HIV infection and HIV-1 integrase. We also demonstrated that IL-6R specific RNA aptamers not only bind HIV-1 integrase and inhibit its 3' processing activity in vitro, but also are capable of preventing HIV de novo infection with the same efficacy as the established inhibitor T30175. All these aptamer target interactions are highly dependent on formation of quadruplex structure.

Indexed as

Aptamers, NucleotideCircular DichroismDrug Evaluation, PreclinicalG-QuadruplexesHeLa CellsHIV-1HIV Envelope Protein gp120HIV InfectionsHIV IntegraseHIV Integrase InhibitorsHumansOligonucleotidesReceptors, Interleukin-6Virus AttachmentAptamers, Nucleotidegp120 protein, Human immunodeficiency virus 1HIV Envelope Protein gp120HIV IntegraseHIV Integrase InhibitorsIL6R protein, humanOligonucleotidesReceptors, Interleukin-6T30923aptamersgp120G-quadruplexHIVHIV integraseinterleukin 6 receptor

Identifiers

PMID23235494
PMCPMC3594281
OpenAlexW2053224884

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.