Evidence map›Paper›PMID 23235471›Full record

ArticleViruses2012

Identification and characterization of a novel alpaca respiratory coronavirus most closely related to the human coronavirus 229E.

Beate M Crossley, Richard E Mock, Scott A Callison, Sharon K Hietala

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
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  9. Human coronaviruses: Origin, host and receptor.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2022
    Review
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  20. Coronavirus Infections of Animals: Future Risks to Humans.Biology bulletin of the Russian Academy of Sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Beate M CrossleyCalifornia Animal Health and Food Safety Laboratory System, University of California-Davis, Davis, West Health Sciences Drive, CA 95616, USA. BCrossle@cahfs.ucdavis.edu
Richard E Mock
Scott A Callison
Sharon K Hietala
University of California, Davis · USWest Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In 2007, a novel coronavirus associated with an acute respiratory disease in alpacas (Alpaca Coronavirus, ACoV) was isolated. Full-length genomic sequencing of the ACoV demonstrated the genome to be consistent with other Alphacoronaviruses. A putative additional open-reading frame was identified between the nucleocapsid gene and 3'UTR. The ACoV was genetically most similar to the common human coronavirus (HCoV) 229E with 92.2% nucleotide identity over the entire genome. A comparison of spike gene sequences from ACoV and from HCoV-229E isolates recovered over a span of five decades showed the ACoV to be most similar to viruses isolated in the 1960's to early 1980's. The true origin of the ACoV is unknown, however a common ancestor between the ACoV and HCoV-229E appears to have existed prior to the 1960's, suggesting virus transmission, either as a zoonosis or anthroponosis, has occurred between alpacas and humans.

Indexed as

Genome, ViralSequence Analysis, DNAAnimalsCamelids, New WorldCoronavirusCoronavirus InfectionsForensic AnthropologyMolecular Sequence DataPhylogenyRespiratory Tract InfectionsRNA, ViralSequence HomologyViral ProteinsRNA, ViralViral Proteins

Identifiers

PMID23235471
PMCPMC3528286
OpenAlexW1984963559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.