Evidence map›Paper›PMID 23234573›Full record

ArticleThe Biochemical journal2013

High-resolution NMR studies of structure and dynamics of human ERp27 indicate extensive interdomain flexibility.

Nader T Amin, A Katrine Wallis, Stephen A Wells, Michelle L Rowe, Richard A Williamson, Mark J Howard, Robert B Freedman

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. PDI Family Members as Guides for Client Folding and Assembly.International journal of molecular sciences · 2020
    Review
  3. Review
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Nader T AminSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, UK.
A Katrine Wallis
Stephen A Wells
Michelle L Rowe
Richard A Williamson
Mark J Howard
Robert B Freedman
University of Warwick · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D018072/1Medical Research Council MC_U117533887Wellcome Trust
6 · The paper itself

Abstract

ERp27 (endoplasmic reticulum protein 27.7 kDa) is a homologue of PDI (protein disulfide-isomerase) localized to the endoplasmic reticulum. ERp27 is predicted to consist of two thioredoxin-fold domains homologous with the non-catalytic b and b' domains of PDI. The structure in solution of the N-terminal b-like domain of ERp27 was solved using high-resolution NMR data. The structure confirms that it has the thioredoxin fold and that ERp27 is a member of the PDI family. (15)N-NMR relaxation data were obtained and ModelFree analysis highlighted limited exchange contributions and slow internal motions, and indicated that the domain has an average order parameter S(2) of 0.79. Comparison of the single-domain structure determined in the present study with the equivalent domain within full-length ERp27, determined independently by X-ray diffraction, indicated very close agreement. The domain interface inferred from NMR data in solution was much more extensive than that observed in the X-ray structure, suggesting that the domains flex independently and that crystallization selects one specific interdomain orientation. This led us to apply a new rapid method to simulate the flexibility of the full-length protein, establishing that the domains show considerable freedom to flex (tilt and twist) about the interdomain linker, consistent with the NMR data.

Indexed as

Binding SitesEndoplasmic ReticulumHeat-Shock ProteinsHumansModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein Disulfide-IsomerasesProtein FoldingProtein Structure, TertiaryX-Ray DiffractionERp27 protein, humanHeat-Shock ProteinsProtein Disulfide-Isomerases

Identifiers

PMID23234573
PMCPMC4203274
OpenAlexW2018882320

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.