Evidence map›Paper›PMID 23233666›Full record

ArticleThe Journal of biological chemistry2013

Serine arginine splicing factor 3 is involved in enhanced splicing of glucose-6-phosphate dehydrogenase RNA in response to nutrients and hormones in liver.

Callee M Walsh, Amanda L Suchanek, Travis J Cyphert, Alison B Kohan, Wioletta Szeszel-Fedorowicz, Lisa M Salati

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 36 citations in OpenAlex.

  1. Trial
  2. Alternative Splicing Regulation in Metabolic Disorders.Obesity reviews : an official journal of the International Association for the Study of Obesity · 2025
    Review
  3. Article
  4. The regulation of carnitine palmitoyltransferase 1 (Biochemistry and biophysics reports · 2024
    Article
  5. Oncogenic SRSF3 in health and diseases.International journal of biological sciences · 2023
    Review
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Palmitate- and C6 ceramide-inducedNutrition & metabolism · 2018
    Article
  14. Article
  15. Intersections of post-transcriptional gene regulatory mechanisms with intermediary metabolism.Biochimica et biophysica acta. Gene regulatory mechanisms · 2017
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Callee M WalshDepartment of Biochemistry, West Virginia University, Morgantown, West Virginia 26506, USA.
Amanda L Suchanek
Travis J Cyphert
Alison B Kohan
Wioletta Szeszel-Fedorowicz
Lisa M Salati
West Virginia University · US

Funding

REGULATION OF GENE EXPRESSION BY DIETARY FATR01DK046897 · NIDDK · WEST VIRGINIA UNIVERSITY · PI SALATI, LISA M · 1999 to 2012
$2.8M
Research Training in Cardiovascular and Pulmonary DiseasesT32HL090610 · NHLBI · WEST VIRGINIA UNIVERSITY · PI MUSTAFA, S. JAMAL · 2008 to 2012
$1.5M
Regulation of Gene Expression by Dietary FatR56DK046897 · NIDDK · WEST VIRGINIA UNIVERSITY · PI SALATI, LISA M · 2008 to 2008
$273k
REGULATION OF GENE EXPRESSION BY DIETARY FATR29DK046897 · NIDDK · WEST VIRGINIA UNIVERSITY · PI SALATI, LISA M · 1993 to 1997
–
NHLBI NIH HHS T32 HL090610NIDDK NIH HHS DK46897NIDDK NIH HHS R01 DK046897NIDDK NIH HHS R56 DK046897
6 · The paper itself

Abstract

Expression of G6PD is controlled by changes in the degree of splicing of the G6PD mRNA in response to nutrients in the diet. This regulation involves an exonic splicing enhancer (ESE) in exon 12 of the mRNA. Using the G6PD model, we demonstrate that nutrients and hormones control the activity of serine-arginine-rich (SR) proteins, a family of splicing co-activators, and thereby regulate the splicing of G6PD mRNA. In primary rat hepatocyte cultures, insulin increased the amount of phosphorylated SR proteins, and this effect was counteracted by arachidonic acid. The results of RNA affinity analysis with nuclear extracts from intact liver demonstrated that the SR splicing factor proteins SRSF3 and SRSF4 bound to the G6PD ESE. Consequently, siRNA-mediated depletion of SRSF3, but not SRSF4, in liver cells inhibited accumulation of both mRNA expressed from a minigene containing exon 12 and the endogenous G6PD mRNA. Consistent with the functional role of SRSF3 in regulating splicing, SRSF3 was observed to bind to the ESE in both intact cells and in animals using RNA immunoprecipitation analysis. Furthermore, refeeding significantly increased the binding of SRSF3 coincident with increased splicing and expression of G6PD. Together, these data establish that nutritional regulation of SRSF3 activity is involved in the differential splicing of the G6PD transcript in response to nutrients. Nutritional regulation of other SR proteins presents a regulatory mechanism that could cause widespread changes in mRNA splicing. Nutrients are therefore novel regulators of mRNA splicing.

Indexed as

Gene Expression RegulationAnimalsArachidonic AcidGlucosephosphate DehydrogenaseHepatocytesHep G2 CellsHumansLiverMaleMiceMice, Inbred C57BLProtein BindingRatsRats, Sprague-DawleyRNARNA-Binding ProteinsArachidonic AcidGlucosephosphate DehydrogenaseRNARNA-Binding ProteinsRNA, MessengerSerine-Arginine Splicing FactorsSRSF3 protein, humanSrsf3 protein, mouseSRSF3 protein, rat

Identifiers

PMID23233666
PMCPMC3554946
OpenAlexW2021628982

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.