Evidence map›Paper›PMID 23233654›Full record

ArticleAnnals of the rheumatic diseases2013

Genome-wide association analysis of anti-TNF drug response in patients with rheumatoid arthritis.

Maša Umiċeviċ Mirkov, Jing Cui, Sita H Vermeulen, Eli A Stahl, Erik J M Toonen, Remco R Makkinje, Annette T Lee, Tom W J Huizinga, Renee Allaart, Anne Barton and 22 more

Registry-linked trialAbstract read
In one paragraph

Article in Annals of the rheumatic diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02878161 (Screening Protein Predictive of Response to Tumor Necrosis Factor-α Inhibitors Treatment in Chinese Rheumatoid Arthritis From "Real World" and Investigating Its Mechanism Through Signal Pathway), which is not on this map. Cited by 61 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02878161 phase4unknown statusnot on this mapstarted 2016, after this paper: background citation

Screening Protein Predictive of Response to Tumor Necrosis Factor-α Inhibitors Treatment in Chinese Rheumatoid Arthritis From "Real World" and Investigating Its Mechanism Through Signal Pathway

TypeinterventionalSponsorFen LiRan2016 to 2019Enrolled240ConditionsRheumatoid ArthritisArmsmethotrexate(necessary), infliximab, etanercept, adalimumab, leflunomide (permitted, not necessary)
3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 6 syntheses or guidelines pooled it.

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  12. International journal of molecular sciences · 2023
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  17. Pharmacogenetics of Drug Therapies in Rheumatoid Arthritis.Methods in molecular biology (Clifton, N.J.) · 2022
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors.

Maša Umiċeviċ MirkovDepartment of Human Genetics, Radboud University Nijmegen Medical Centre, , Nijmegen, The Netherlands.
Jing Cui
Sita H Vermeulen
Eli A Stahl
Erik J M Toonen
Remco R Makkinje
Annette T Lee
Tom W J Huizinga
Renee Allaart
Anne Barton
Xavier Mariette
Corinne Richard Miceli
Lindsey A Criswell
Paul P Tak
Niek de Vries
Saedis Saevarsdottir
Leonid Padyukov
S Louis Bridges
Dirk-Jan van Schaardenburg
Tim L Jansen
Ellen A J Dutmer
Mart A F J van de Laar
Pilar Barrera
Timothy R D J Radstake
Piet L C M van Riel
Hans Scheffer
Barbara Franke
Han G Brunner
Robert M Plenge
Peter K Gregersen
Henk-Jan Guchelaar
Marieke J H Coenen

Funding

Zevalin Radioimmunotherapy Using a Modified TreatmentM01RR000032 · NCRR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI RICH, ROBERT R. · 1985 to 2008
$23.6M
Genetic predictors of response to anti-TNF therapy in rheumatoid arthritisU01GM092691 · NIGMS · BRIGHAM AND WOMEN'S HOSPITAL · PI BRENNER, MICHAEL B., RAYCHAUDHURI, SOUMYA · 2010 to 2014
$7.5M
Dissection of two rheumatoid arthritis risk loci from genome-wide studiesR01AR056768 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI BRENNER, MICHAEL B. · 2009 to 2013
$1.9M
Predictors of Treatment Response in Early Aggressive RAR01AR052658 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BRIDGES, S LOUIS · 2004 to 2007
$1.2M
Meta-analysis of GWAS data to identify novel rheumatoid arthritis risk lociR01AR057108 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI PLENGE, ROBERT M · 2009 to 2010
$557k
Deep Re-Sequencing of Rheumatoid Arthritis Risk LociR01AR059648 · NIAMS · BROAD INSTITUTE, INC. · PI PLENGE, ROBERT M · 2010 to 2011
$493k
GENETIC PREDICTORS OF RESPONSE TO TREATMENT IN EARLY RAR01AR047224 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BRIDGES, S LOUIS · 2000 to 2001
$488k
NCRR NIH HHS M01 RR000032NIAMS NIH HHS R01 AR052658NIAMS NIH HHS R01 AR056768NIAMS NIH HHS R01-AR056768NIAMS NIH HHS R01 AR057108NIAMS NIH HHS R01-AR057108NIAMS NIH HHS R01 AR059648NIAMS NIH HHS R01-AR059648NIGMS NIH HHS U01 GM092691NIGMS NIH HHS U01-GM092691
6 · The paper itself

Abstract

backgroundTreatment strategies blocking tumour necrosis factor (anti-TNF) have proven very successful in patients with rheumatoid arthritis (RA). However, a significant subset of patients does not respond for unknown reasons. Currently, there are no means of identifying these patients before treatment. This study was aimed at identifying genetic factors predicting anti-TNF treatment outcome in patients with RA using a genome-wide association approach.

methodsWe conducted a multistage, genome-wide association study with a primary analysis of 2 557 253 single-nucleotide polymorphisms (SNPs) in 882 patients with RA receiving anti-TNF therapy included through the Dutch Rheumatoid Arthritis Monitoring (DREAM) registry and the database of Apotheekzorg. Linear regression analysis of changes in the Disease Activity Score in 28 joints after 14 weeks of treatment was performed using an additive model. Markers with p<10(-3) were selected for replication in 1821 patients from three independent cohorts. Pathway analysis including all SNPs with p<10(-3) was performed using Ingenuity.

results772 markers showed evidence of association with treatment outcome in the initial stage. Eight genetic loci showed improved p value in the overall meta-analysis compared with the first stage, three of which (rs1568885, rs1813443 and rs4411591) showed directional consistency over all four cohorts studied. We were unable to replicate markers previously reported to be associated with anti-TNF outcome. Network analysis indicated strong involvement of biological processes underlying inflammatory response and cell morphology.

conclusionsUsing a multistage strategy, we have identified eight genetic loci associated with response to anti-TNF treatment. Further studies are required to validate these findings in additional patient collections.

Indexed as

Genetic MarkersGenome-Wide Association StudyPolymorphism, Single NucleotideAdalimumabAntibodies, MonoclonalAntibodies, Monoclonal, HumanizedAntirheumatic AgentsArthritis, RheumatoidDNA Mutational AnalysisDrug ResistanceEtanerceptFemaleGene Expression RegulationHumansImmunoglobulin GInfliximabAdalimumabAntibodies, MonoclonalAntibodies, Monoclonal, HumanizedAntirheumatic AgentsEtanerceptGenetic MarkersImmunoglobulin GInfliximabReceptors, Tumor Necrosis FactorTumor Necrosis Factor-alphaAnti-TNFGene PolymorphismPharmacogeneticsRheumatoid Arthritis

Identifiers

PMID23233654
PMCPMC4169706

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.