Evidence map›Paper›PMID 23233528›Full record

ArticleScience signaling2012

TIM family proteins promote the lysosomal degradation of the nuclear receptor NUR77.

Savithri Balasubramanian, Satya Keerthi Kota, Vijay K Kuchroo, Benjamin D Humphreys, Terry B Strom

Abstract read
In one paragraph

Article in Science signaling, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
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  12. Tryptase and TIM-1 double-positive mast cells in different stages of human chronic periodontitis.International journal of clinical and experimental pathology · 2018
    Article
  13. Article
  14. Article
  15. G protein αAmerican journal of physiology. Renal physiology · 2016
    Article
  16. Article
  17. Immune Regulation and Antitumor Effect of TIM-1.Journal of immunology research · 2016
    Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Savithri BalasubramanianHarvard Medical School, Department of Medicine, The Transplant Institute, Beth Israel Deaconess Medical Center, Boston, MA 02115, USA. skota@bidmc.harvard.edu
Satya Keerthi Kota
Vijay K Kuchroo
Benjamin D Humphreys
Terry B Strom
Centre National de la Recherche Scientifique · FR

Funding

Transgenic / Knock-out mouse coreP01AI073748 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI BEHAR, SAMUEL M · 2008 to 2019
$17.1M
Hedgehog Signaling in Kidney Homeostasis and RepairR01DK088923 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI HUMPHREYS, BENJAMIN D. · 2010 to 2014
$2.0M
Medical Research Council MR/J006742/1NIAID NIH HHS 1P01 AI073748-01A1NIAID NIH HHS P01 AI073748NIDDK NIH HHS R01 DK088923
6 · The paper itself

Abstract

T cell immunoglobulin and mucin domain (TIM) proteins are cell-surface signaling receptors in T cells and scavenger receptors in antigen-presenting cells and kidney tubular epithelia. Here, we demonstrated a function for TIM proteins in mediating the degradation of NUR77, a nuclear receptor implicated in apoptosis and cell survival. TIM proteins interacted with and mediated the lysosomal degradation of NUR77 in a phosphoinositide 3-kinase-dependent pathway. We also showed dynamic cycling of TIM-1 to and from the cell surface through clathrin-dependent constitutive endocytosis. Blocking this process or mutating the phosphatidylserine-binding pocket in TIM-1 abrogated TIM-1-mediated degradation of NUR77. In an in vitro model of kidney injury, silencing TIM-1 increased NUR77 abundance and decreased epithelial cell survival. These results show that TIM proteins may affect immune cell function and the response of the kidney to injury.

Indexed as

ProteolysisAnimalsBlotting, WesternChlorocebus aethiopsCOS CellsDNA PrimersElectrophoretic Mobility Shift AssayEndocytosisEpithelial CellsFlow CytometryFluorescent Antibody TechniqueHEK293 CellsHeLa CellsHepatitis A Virus Cellular Receptor 1HumansKidneyDNA PrimersHAVCR1 protein, humanHepatitis A Virus Cellular Receptor 1LuciferasesMembrane GlycoproteinsNuclear Receptor Subfamily 4, Group A, Member 1Phosphatidylinositol 3-KinasesReceptors, Virus

Identifiers

PMID23233528
PMCPMC3767312
OpenAlexW1996285802

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.