Evidence map›Paper›PMID 23229911›Full record

ArticleProteins2013

Solution structures of Mycobacterium tuberculosis thioredoxin C and models of intact thioredoxin system suggest new approaches to inhibitor and drug design.

Andrew L Olson, Terrence S Neumann, Sheng Cai, Daniel S Sem

Open access · greenAbstract read
In one paragraph

Article in Proteins, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Transcriptional Response ofFrontiers in microbiology · 2021
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Andrew L OlsonDepartment of Chemistry, Marquette University, Milwaukee, Wisconsin 53201, USA.
Terrence S Neumann
Sheng Cai
Daniel S Sem
Marquette University · US

Funding

WATER DISTRIB:PHYSICAL PROPERT:PIZZA &LMPS MOZZARELLA CHEESES:EARLY STAGE MATURP41RR002301 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 1985 to 2011
$13.0M
SMART TEAMS: PROJECT-BASED PROFESSIONAL DEVELOPMENTR25RR018498 · NCRR · MILWAUKEE SCHOOL OF ENGINEERING · PI HERMAN, TIM M. · 2003 to 2004
$648k
600 MHz Nuclear Magnetic Resonance SpectrometerS10RR019012 · NCRR · MARQUETTE UNIVERSITY · PI SEM, DANIEL S · 2005 to 2005
$500k
Structural Characterization of the M. tuberculosis Thioredoxin SystemR15AI101975 · NIAID · CONCORDIA UNIVERSITY WISCONSIN · PI SEM, DANIEL S · 2012 to 2012
$383k
Implications of Binding Synergy for Fragment Assembly: A Dynamics PerspectiveR15GM085739 · NIGMS · MARQUETTE UNIVERSITY · PI SEM, DANIEL S · 2009 to 2009
$218k
NCRR NIH HHS P41 RR002301NCRR NIH HHS R25 RR018498NCRR NIH HHS S10 RR019012NIAID NIH HHS AI101975NIAID NIH HHS R15 AI101975NIGMS NIH HHS GM085739NIGMS NIH HHS R15 GM085739
6 · The paper itself

Abstract

Here, we report the NMR solution structures of Mycobacterium tuberculosis (M. tuberculosis) thioredoxin C in both oxidized and reduced states, with discussion of structural changes that occur in going between redox states. The NMR solution structure of the oxidized TrxC corresponds closely to that of the crystal structure, except in the C-terminal region. It appears that crystal packing effects have caused an artifactual shift in the α4 helix in the previously reported crystal structure, compared with the solution structure. On the basis of these TrxC structures, chemical shift mapping, a previously reported crystal structure of the M. tuberculosis thioredoxin reductase (not bound to a Trx) and structures for intermediates in the E. coli thioredoxin catalytic cycle, we have modeled the complete M. tuberculosis thioredoxin system for the various steps in the catalytic cycle. These structures and models reveal pockets at the TrxR/TrxC interface in various steps in the catalytic cycle, which can be targeted in the design of uncompetitive inhibitors as potential anti-mycobacterial agents, or as chemical genetic probes of function.

Indexed as

Bacterial ProteinsCatalytic DomainModels, MolecularMycobacterium tuberculosisNuclear Magnetic Resonance, BiomolecularOxidation-ReductionProtein BindingProtein ConformationThioredoxin-Disulfide ReductaseThioredoxinsBacterial ProteinsThioredoxin-Disulfide ReductaseThioredoxins

Identifiers

PMID23229911
PMCPMC3620657
OpenAlexW1974981032

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.