Evidence map›Paper›PMID 23229474›Full record

ArticleImmunogenetics2013

Dynamics of free versus complexed β2-microglobulin and the evolution of interfaces in MHC class I molecules.

Chee-Seng Hee, Monika Beerbaum, Bernhard Loll, Martin Ballaschk, Peter Schmieder, Barbara Uchanska-Ziegler, Andreas Ziegler

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. The MHC class I genes of zebrafish.Developmental and comparative immunology · 2014
    Review
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chee-Seng HeeInstitut für Immungenetik, Charité-Universitätsmedizin Berlin, Freie Universität Berlin, Berlin, Germany.
Monika Beerbaum
Bernhard Loll
Martin Ballaschk
Peter Schmieder
Barbara Uchanska-Ziegler
Andreas Ziegler

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In major histocompatibility complex (MHC) class I molecules, monomorphic β(2)-microglobulin (β(2)m) is non-covalently bound to a heavy chain (HC) exhibiting a variable degree of polymorphism. β(2)M can stabilize a wide variety of complexes ranging from classical peptide binding to nonclassical lipid presenting MHC class I molecules as well as to MHC class I-like molecules that do not bind small ligands. Here we aim to assess the dynamics of individual regions in free as well as complexed β(2)m and to understand the evolution of the interfaces between β(2)m and different HC. Using human β(2)m and the HLA-B*27:09 complex as a model system, a comparison of free and HC-bound β(2)m by nuclear magnetic resonance spectroscopy was initially carried out. Although some regions retain their flexibility also after complex formation, these studies reveal that most parts of β(2)m gain rigidity upon binding to the HC. Sequence analyses demonstrate that some of the residues exhibiting flexibility participate in evolutionarily conserved β(2)m-HC contacts which are detectable in diverse vertebrate species or characterize a particular group of MHC class I complexes such as peptide- or lipid-binding molecules. Therefore, the spectroscopic experiments and the interface analyses demonstrate that β(2)m fulfills its role of interacting with diverse MHC class I HC as well as effector cell receptors not only by engaging in conserved intermolecular contacts but also by falling back upon key interface residues that exhibit a high degree of flexibility.

Indexed as

Magnetic Resonance SpectroscopyAmino Acid SequenceAnimalsbeta 2-MicroglobulinConserved SequenceEvolution, MolecularGenes, MHC Class IGenes, MHC Class IIHistocompatibility Antigens Class IHistocompatibility Antigens Class IIHLA-B27 AntigenHumansModels, MolecularMolecular Sequence DataProtein BindingProtein Conformationbeta 2-MicroglobulinHistocompatibility Antigens Class IHistocompatibility Antigens Class IIHLA-B27 AntigenReceptors, Antigen, T-Cell

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.