Evidence map›Paper›PMID 23227921›Full record

ArticleBMC veterinary research2012

Genotyping of Coxiella burnetii from domestic ruminants in northern Spain.

Ianire Astobiza, Jeroen J H C Tilburg, Alvaro Piñero, Ana Hurtado, Ana L García-Pérez, Marrigje H Nabuurs-Franssen, Corné H W Klaassen

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 48 citations in OpenAlex.

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  8. Q Fever-A Neglected Zoonosis.Microorganisms · 2022
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  13. Correlating Genotyping Data ofPathogens (Basel, Switzerland) · 2021
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  14. Comparison ofPathogens (Basel, Switzerland) · 2020
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  15. MonitoringFrontiers in veterinary science · 2020
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  16. Phylogeography of Human and AnimalFrontiers in cellular and infection microbiology · 2020
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  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ianire AstobizaNEIKER-Instituto Vasco de Investigación y Desarrollo Agrario, Department of Animal Health, Derio, Bizkaia, Spain.
Jeroen J H C Tilburg
Alvaro Piñero
Ana Hurtado
Ana L García-Pérez
Marrigje H Nabuurs-Franssen
Corné H W Klaassen
Canisius-Wilhelmina Ziekenhuis · NLEuskadiko Parke Teknologikoa · ESNEIKER, the Basque Institute for Agricultural Research and Development · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInformation on the genotypic diversity of Coxiella burnetii isolates from infected domestic ruminants in Spain is limited. The aim of this study was to identify the C. burnetii genotypes infecting livestock in Northern Spain and compare them to other European genotypes. A commercial real-time PCR targeting the IS1111a insertion element was used to detect the presence of C. burnetii DNA in domestic ruminants from Spain. Genotypes were determined by a 6-loci Multiple Locus Variable number tandem repeat analysis (MLVA) panel and Multispacer Sequence Typing (MST).

resultsA total of 45 samples from 4 goat herds (placentas, N = 4), 12 dairy cattle herds (vaginal mucus, individual milk, bulk tank milk, aerosols, N = 20) and 5 sheep flocks (placenta, vaginal swabs, faeces, air samples, dust, N = 21) were included in the study. Samples from goats and sheep were obtained from herds which had suffered abortions suspected to be caused by C. burnetii, whereas cattle samples were obtained from animals with reproductive problems compatible with C. burnetii infection, or consisted of bulk tank milk (BTM) samples from a Q fever surveillance programme. C. burnetii genotypes identified in ruminants from Spain were compared to those detected in other countries. Three MLVA genotypes were found in 4 goat farms, 7 MLVA genotypes were identified in 12 cattle herds and 4 MLVA genotypes were identified in 5 sheep flocks. Clustering of the MLVA genotypes using the minimum spanning tree method showed a high degree of genetic similarity between most MLVA genotypes. Overall 11 different MLVA genotypes were obtained corresponding to 4 different MST genotypes: MST genotype 13, identified in goat, sheep and cattle from Spain; MST genotype 18, only identified in goats; and, MST genotypes 8 and 20, identified in small ruminants and cattle, respectively. All these genotypes had been previously identified in animal and human clinical samples from several European countries, but some of the MLVA genotypes are described here for the first time.

conclusionsGenotyping revealed a substantial genetic diversity among domestic ruminants from Northern Spain.

Indexed as

AnimalsCattleCattle DiseasesCoxiella burnetiiGenotypeGoat DiseasesGoatsQ FeverSheepSheep DiseasesSpain

Identifiers

PMID23227921
PMCPMC3528428
OpenAlexW2085581177

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.