Evidence map›Paper›PMID 23227186›Full record

ArticlePloS one2012

The Penicillium echinulatum secretome on sugar cane bagasse.

Daniela A Ribeiro, Júnio Cota, Thabata M Alvarez, Fernanda Brüchli, Juliano Bragato, Beatriz M P Pereira, Bianca A Pauletti, George Jackson, Maria T B Pimenta, Mario T Murakami and 6 more

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Gene Regulatory Networks ofFrontiers in microbiology · 2020
    Article
  11. Transcriptome Profiling-Based Analysis of Carbohydrate-Active Enzymes inFrontiers in bioengineering and biotechnology · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Enhancement of Penicillium echinulatum glycoside hydrolase enzyme complex.Journal of industrial microbiology & biotechnology · 2016
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Daniela A RibeiroLaboratório Nacional de Ciência e Tecnologia do Bioetanol, CTBE, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, CNPEM, Campinas, São Paulo, Brazil.
Júnio Cota
Thabata M Alvarez
Fernanda Brüchli
Juliano Bragato
Beatriz M P Pereira
Bianca A Pauletti
George Jackson
Maria T B Pimenta
Mario T Murakami
Marli Camassola
Roberto Ruller
Aldo J P Dillon
Jose G C Pradella
Adriana F Paes Leme
Fabio M Squina

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant feedstocks are at the leading front of the biofuel industry based on the potential to promote economical, social and environmental development worldwide through sustainable scenarios related to energy production. Penicillium echinulatum is a promising strain for the bioethanol industry based on its capacity to produce large amounts of cellulases at low cost. The secretome profile of P. echinulatum after grown on integral sugarcane bagasse, microcrystalline cellulose and three types of pretreated sugarcane bagasse was evaluated using shotgun proteomics. The comprehensive chemical characterization of the biomass used as the source of fungal nutrition, as well as biochemical activity assays using a collection of natural polysaccharides, were also performed. Our study revealed that the enzymatic repertoire of P. echinulatum is geared mainly toward producing enzymes from the cellulose complex (endogluganases, cellobiohydrolases and β-glucosidases). Glycoside hydrolase (GH) family members, important to biomass-to-biofuels conversion strategies, were identified, including endoglucanases GH5, 7, 6, 12, 17 and 61, β-glycosidase GH3, xylanases GH10 and GH11, as well as debranching hemicellulases from GH43, GH62 and CE2 and pectinanes from GH28. Collectively, the approach conducted in this study gave new insights on the better comprehension of the composition and degradation capability of an industrial cellulolytic strain, from which a number of applied technologies, such as biofuel production, can be generated.

Indexed as

BiomassChromatography, LiquidMicroscopy, Electron, ScanningPenicilliumSaccharumTandem Mass Spectrometry

Identifiers

PMID23227186
PMCPMC3515617

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.