Evidence map›Paper›PMID 23226217›Full record

ArticlePloS one2012

Role of histone deacetylases in gene regulation at nuclear lamina.

Beatrice C Milon, Haibo Cheng, Mikhail V Tselebrovsky, Sergei A Lavrov, Valentina V Nenasheva, Elena A Mikhaleva, Yuri Y Shevelyov, Dmitry I Nurminsky

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  5. Cancers · 2022
    Article
  6. Review
  7. Article
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  11. Nuclear mechanosensing controls MSC osteogenic potential through HDAC epigenetic remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Spatial chromatin organization and gene regulation at the nuclear lamina.Current opinion in genetics & development · 2019
    Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Beatrice C MilonDepartment of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Baltimore, MD, USA.
Haibo Cheng
Mikhail V Tselebrovsky
Sergei A Lavrov
Valentina V Nenasheva
Elena A Mikhaleva
Yuri Y Shevelyov
Dmitry I Nurminsky
Institute of Molecular Genetics · RUUniversity of Maryland, Baltimore · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Theoretical models suggest that gene silencing at the nuclear periphery may involve "closing" of chromatin by transcriptional repressors, such as histone deacetylases (HDACs). Here we provide experimental evidence confirming these predictions. Histone acetylation, chromatin compactness, and gene repression in lamina-interacting multigenic chromatin domains were analyzed in Drosophila S2 cells in which B-type lamin, diverse HDACs, and lamina-associated proteins were downregulated by dsRNA. Lamin depletion resulted in decreased compactness of the repressed multigenic domain associated with its detachment from the lamina and enhanced histone acetylation. Our data reveal the major role for HDAC1 in mediating deacetylation, chromatin compaction, and gene silencing in the multigenic domain, and an auxiliary role for HDAC3 that is required for retention of the domain at the lamina. These findings demonstrate the manifold and central involvement of class I HDACs in regulation of lamina-associated genes, illuminating a mechanism by which these enzymes can orchestrate normal and pathological development.

Indexed as

Gene Expression RegulationAcetylationAnimalsBlotting, WesternCell LineChromatinChromatin ImmunoprecipitationDrosophila melanogasterDrosophila ProteinsGene SilencingHistone Deacetylase 1Histone Deacetylase 3Histone DeacetylasesHistonesLamin Type BMultigene FamilyChromatinDrosophila ProteinsHDAC1 protein, DrosophilaHistone Deacetylase 1Histone Deacetylase 3Histone DeacetylasesHistonesLamin Type BRNA, Double-Stranded

Identifiers

PMID23226217
PMCPMC3511463
OpenAlexW2093804830

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.