Evidence map›Paper›PMID 23226208›Full record

ArticlePloS one2012

Analysis of group ICA-based connectivity measures from fMRI: application to Alzheimer's disease.

Shanshan Li, Ani Eloyan, Suresh Joel, Stewart Mostofsky, James Pekar, Susan Spear Bassett, Brian Caffo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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  6. A Hybrid of Deep Network and Hidden Markov Model for MCI Identification with Resting-State fMRI.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Shanshan LiDepartment of Biostatistics, Johns Hopkins University, Baltimore, MD, USA. shli@jhsph.edu
Ani Eloyan
Suresh Joel
Stewart Mostofsky
James Pekar
Susan Spear Bassett
Brian Caffo
Johns Hopkins University · USKennedy Krieger Institute · US

Funding

TR&D 4: Algorithms for functional and anatomical brain analysisP41EB015909 · NIBIB · HUGO W. MOSER RES INST KENNEDY KRIEGER · PI VAN ZIJL, PETER CM · 2012 to 2020
$13.1M
Statistical Methods for Multilevel Multivariate Functional StudiesR01NS060910 · NINDS · JOHNS HOPKINS UNIVERSITY · PI Ciprian M Crainiceanu · 2009 to 2026
$8.3M
Brain Imaging & Cognition in Subjects at Risk for Alzheimer's DiseaseR01AG016324 · NIA · JOHNS HOPKINS UNIVERSITY · PI BASSETT, SUSAN SPEAR · 2000 to 2013
$6.6M
Statistical methods for large n and p problemsR01EB012547 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI CAFFO, BRIAN SCOTT · 2010 to 2016
$2.1M
NIA NIH HHS R01 AG 016324NIA NIH HHS R01 AG016324NIBIB NIH HHS P41 EB015909NIBIB NIH HHS R01 EB012547NINDS NIH HHS R01 NS060910NINDS NIH HHS R01NS060910
6 · The paper itself

Abstract

Functional magnetic resonance imaging (fMRI) is a powerful tool for the in vivo study of the pathophysiology of brain disorders and disease. In this manuscript, we propose an analysis stream for fMRI functional connectivity data and apply it to a novel study of Alzheimer's disease. In the first stage, spatial independent component analysis is applied to group fMRI data to obtain common brain networks (spatial maps) and subject-specific mixing matrices (time courses). In the second stage, functional principal component analysis is utilized to decompose the mixing matrices into population-level eigenvectors and subject-specific loadings. Inference is performed using permutation-based exact logistic regression for matched pairs data. The method is applied to a novel fMRI study of Alzheimer's disease risk under a verbal paired associates task. We found empirical evidence of alternative ICA-based metrics of connectivity when comparing subjects evidencing mild cognitive impairment relative to carefully matched controls.

Indexed as

AgedAlgorithmsAlzheimer DiseaseBrainBrain MappingCase-Control StudiesCognitive DysfunctionFemaleHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingMaleMiddle AgedNerve NetPrincipal Component AnalysisTask Performance and Analysis

Identifiers

PMID23226208
PMCPMC3511486
OpenAlexW2044164381

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.