Evidence map›Paper›PMID 23223242›Full record

ArticleThe Journal of biological chemistry2013

Pathogenic serum amyloid A 1.1 shows a long oligomer-rich fibrillation lag phase contrary to the highly amyloidogenic non-pathogenic SAA2.2.

Saipraveen Srinivasan, Sanket Patke, Yun Wang, Zhuqiu Ye, Jeffrey Litt, Sunit K Srivastava, Maria M Lopez, Dmitry Kurouski, Igor K Lednev, Ravi S Kane and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
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  4. Article
  5. Elucidation of molecular mechanisms by which amyloid βBiochimica et biophysica acta. Molecular and cell biology of lipids · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Lipids uniquely alter rates of insulin aggregation and lower toxicity of amyloid aggregates.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2023
    Article
  13. Article
  14. Amyloid aggregates exert cell toxicity causing irreversible damages in the endoplasmic reticulum.Biochimica et biophysica acta. Molecular basis of disease · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Serum amyloid A - a review.Molecular medicine (Cambridge, Mass.) · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Saipraveen SrinivasanDepartment of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, Troy, New York 12180, USA.
Sanket Patke
Yun Wang
Zhuqiu Ye
Jeffrey Litt
Sunit K Srivastava
Maria M Lopez
Dmitry Kurouski
Igor K Lednev
Ravi S Kane
Wilfredo Colón
Department of Biotechnology · INRensselaer Polytechnic Institute · USAlbany State University · USBiotechnology Research Center · IRUniversity at Albany, State University of New York · US

Funding

Mechanism and structural basis of amyloid fibril formation by serum amyloid AR01AG028158 · NIA · RENSSELAER POLYTECHNIC INSTITUTE · PI COLON, WILFREDO · 2007 to 2011
$1.1M
Structural Characterization of Amyloid Fibrils Using Deep UV Raman SpectroscopyR01AG033719 · NIA · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI LEDNEV, IGOR K · 2010 to 2014
$1.0M
NIA NIH HHS R01 AG028158NIA NIH HHS R01 AG033719
6 · The paper itself

Abstract

Serum amyloid A (SAA) is best known for being the main component of amyloid in the inflammation-related disease amyloid A (AA) amyloidosis. Despite the high sequence identity among different SAA isoforms, not all SAA proteins are pathogenic. In most mouse strains, the AA deposits mostly consist of SAA1.1. Conversely, the CE/J type mouse expresses a single non-pathogenic SAA2.2 protein that is 94% identical to SAA1.1. Here we show that SAA1.1 and SAA2.2 differ in their quaternary structure, fibrillation kinetics, prefibrillar oligomers, and fibril morphology. At 37 °C and inflammation-related SAA concentrations, SAA1.1 exhibits an oligomer-rich fibrillation lag phase of a few days, whereas SAA2.2 shows virtually no lag phase and forms small fibrils within a few hours. Deep UV resonance Raman, far UV-circular dichroism, atomic force microscopy, and fibrillation cross-seeding experiments suggest that SAA1.1 and SAA2.2 fibrils possess different morphology. Both the long-lived oligomers of pathogenic SAA1.1 and the fleeting prefibrillar oligomers of non-pathogenic SAA2.2, but not their respective amyloid fibrils, permeabilized synthetic bilayer membranes in vitro. This study represents the first comprehensive comparison between the biophysical properties of SAA isoforms with distinct pathogenicities, and the results suggest that structural and kinetic differences in the oligomerization-fibrillation of SAA1.1 and SAA2.2, more than their intrinsic amyloidogenicity, may contribute to their diverse pathogenicity.

Indexed as

AmyloidosisAnimalsBiophysicsCircular DichroismHEK293 CellsHumansInflammationKineticsMiceMicroscopy, Atomic ForceProtein BindingProtein DenaturationProtein FoldingProtein IsoformsRecombinant ProteinsSerum Amyloid A ProteinProtein IsoformsRecombinant ProteinsSAA2 protein, humanSaa2 protein, mouseSerum Amyloid A Protein

Identifiers

PMID23223242
PMCPMC3554940
OpenAlexW2091075515

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.