Evidence map›Paper›PMID 23221805›Full record

ArticleHuman molecular genetics2013

Deficiency of FRAS1-related extracellular matrix 1 (FREM1) causes congenital diaphragmatic hernia in humans and mice.

Tyler F Beck, Danielle Veenma, Oleg A Shchelochkov, Zhiyin Yu, Bum Jun Kim, Hitisha P Zaveri, Yolande van Bever, Sunju Choi, Hannie Douben, Terry K Bertin and 7 more

Erratum issuedOpen access · greenAbstract readCase Reports
In one paragraph

Article in Human molecular genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Review
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  4. Frem1 activity is regulated by Sonic hedgehog signaling in the cranial neural crest mesenchyme during midfacial morphogenesis.Developmental dynamics : an official publication of the American Association of Anatomists · 2023
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  12. An omic approach to congenital diaphragmatic hernia: a pilot study of genomic, microRNA, and metabolomic profiling.Journal of perinatology : official journal of the California Perinatal Association · 2020
    Article
  13. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

Tyler F BeckDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Danielle Veenma
Oleg A Shchelochkov
Zhiyin Yu
Bum Jun Kim
Hitisha P Zaveri
Yolande van Bever
Sunju Choi
Hannie Douben
Terry K Bertin
Pragna I Patel
Brendan Lee
Dick Tibboel
Annelies de Klein
David W Stockton
Monica J Justice
Daryl A Scott
Erasmus MC · NLUniversity of Southern California · USBaylor College of Medicine · USHoward Hughes Medical Institute · USUniversity of Iowa · USWayne State University · US

Funding

UNDERSTANDING FXTAS AMONG MALES WITH THE FMR1 PREMUTATIONP30HD024064 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI TOLIAS, KIMBERLY R · 1988 to 2013
$29.4M
MUTATIONS IN DEVELOPMENTAL PATHWAYS BY ENU MUTAGENESISU01HD039372 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI JUSTICE, MONICA JEAN · 2000 to 2005
$17.3M
PROGRAM IN HUMAN MOLECULAR GENETICST32GM008307 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 1990 to 2020
$6.6M
Genetic analysis of mouse chromosome 11R01CA115503 · NCI · BAYLOR COLLEGE OF MEDICINE · PI JUSTICE, MONICA J. · 2006 to 2010
$2.6M
Retinoid-Related Genes in Diaphragm and Cardiac DevelopmentR01HD064667 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI SCOTT, DARYL ARMSTRONG · 2010 to 2014
$1.5M
Recessive Ocular Phenotypes from Murine ENU MutagenesisR03EY014854 · NEI · BAYLOR COLLEGE OF MEDICINE · PI STOCKTON, DAVID W · 2003 to 2005
$444k
NCI NIH HHS R01 CA115503NEI NIH HHS R03 EY014854NICHD NIH HHS 5P30 HD024064NICHD NIH HHS P30 HD024064NICHD NIH HHS R01 HD06466NICHD NIH HHS R01 HD064667NICHD NIH HHS U01 HD039372NICHD NIH HHS U01 HD39372NIGMS NIH HHS T32 GM008307
6 · The paper itself

Abstract

Congenital diaphragmatic hernia (CDH) is a common life-threatening birth defect. Recessive mutations in the FRAS1-related extracellular matrix 1 (FREM1) gene have been shown to cause bifid nose with or without anorectal and renal anomalies (BNAR) syndrome and Manitoba oculotrichoanal (MOTA) syndrome, but have not been previously implicated in the development of CDH. We have identified a female child with an isolated left-sided posterolateral CDH covered by a membranous sac who had no features suggestive of BNAR or MOTA syndromes. This child carries a maternally-inherited ~86 kb FREM1 deletion that affects the expression of FREM1's full-length transcripts and a paternally-inherited splice site mutation that causes activation of a cryptic splice site, leading to a shift in the reading frame and premature termination of all forms of the FREM1 protein. This suggests that recessive FREM1 mutations can cause isolated CDH in humans. Further evidence for the role of FREM1 in the development of CDH comes from an N-ethyl-N-nitrosourea -derived mouse strain, eyes2, which has a homozygous truncating mutation in Frem1. Frem1(eyes2) mice have eye defects, renal agenesis and develop retrosternal diaphragmatic hernias which are covered by a membranous sac. We confirmed that Frem1 is expressed in the anterior portion of the developing diaphragm and found that Frem1(eyes2) embryos had decreased levels of cell proliferation in their developing diaphragms when compared to wild-type embryos. We conclude that FREM1 plays a critical role in the development of the diaphragm and that FREM1 deficiency can cause CDH in both humans and mice.

Indexed as

Hernias, Diaphragmatic, CongenitalAnimalsChildDiaphragmExtracellular Matrix ProteinsFemaleGenes, RecessiveHernia, DiaphragmaticHomozygoteHumansMiceNoseNose DiseasesSequence DeletionExtracellular Matrix ProteinsFRAS1 protein, humanFrem1 protein, mouse

Identifiers

PMID23221805
PMCPMC3561915
OpenAlexW2129640164

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.