Evidence map›Paper›PMID 23219721›Full record

ArticlePlasmid2013

Development of a LacZ-based transcriptional reporter system for use with Moraxella catarrhalis.

Amanda S Evans, Christine Pybus, Eric J Hansen

Open access · greenAbstract read
In one paragraph

Article in Plasmid, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Genome-Wide Analysis of β-Galactosidases inFrontiers in microbiology · 2018
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Amanda S EvansDepartment of Pediatrics, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390, USA. Amanda.Evans@UTSouthwestern.edu
Christine Pybus
Eric J Hansen
Pediatrics and Genetics · USThe University of Texas Southwestern Medical Center · US

Funding

UT-Southwestern Clinical and Translational Alliance for Research (UT-STAR) (TL1)UL1TR000451 · NCATS · UT SOUTHWESTERN MEDICAL CENTER · PI TOTO, ROBERT DANIEL · 2012 to 2012
$6.3M
SURFACE PROTEINS OF MORAXELLA CATARRHALISR01AI036344 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI HANSEN, ERIC JOHN · 1996 to 2013
$3.6M
Infectious Diseases Training ProgramT32AI070116 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI PERL, TRISH M. · 2007 to 2017
$1.1M
NCATS NIH HHS UL1 TR000451NCATS NIH HHS UL1TR000451NIAID NIH HHS AI36344NIAID NIH HHS R01 AI036344NIAID NIH HHS T32 AI070116NIAID NIH HHS T32AI070116
6 · The paper itself

Abstract

The lack of a transcriptional reporter system for use in Moraxella catarrhalis has hindered studies of gene regulation in this pathogen. PCR and recombinant DNA methods were used to insert a multicloning site (MCS) and promoterless full-length Escherichia coli lacZ gene, flanked by transcriptional terminators both immediately upstream and downstream, into the M. catarrhalis recombinant plasmid pWW115. Insertion into the MCS in the newly constructed plasmid pASE222 of M. catarrhalis promoter regions controlled by either a repressor (i.e., NsrR) or activator (i.e., PhoB) yielded transcriptional fusion constructs that were appropriately responsive to signal inputs dependent on the host strain genotype, as measured quantitatively by means of a Miller β-galactosidase assay. The transcriptional reporter plasmid pASE222 should prove to be a useful tool for rapid screening of factors affecting gene expression in M. catarrhalis.

Indexed as

Genes, ReporterTranscription, GeneticBase SequenceEscherichia coliLac OperonMolecular Sequence DataMoraxella catarrhalisPhosphatesPlasmidsPromoter Regions, GeneticPhosphates

Identifiers

PMID23219721
PMCPMC3570615
OpenAlexW1999049809

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.