Evidence map›Paper›PMID 23218701›Full record

ArticleAmerican journal of ophthalmology2013

CYP1B1, MYOC, and LTBP2 mutations in primary congenital glaucoma patients in the United States.

Sing-Hui Lim, Khanh-Nhat Tran-Viet, Tammy L Yanovitch, Sharon F Freedman, Thomas Klemm, Whitney Call, Caldwell Powell, Ajay Ravichandran, Ravikanth Metlapally, Erica B Nading and 2 more

Open access · greenAbstract read
In one paragraph

Article in American journal of ophthalmology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 83 citations in OpenAlex.

  1. Pooled it
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  5. Article
  6. Exploring the Genetic Landscape of Childhood Glaucoma.Children (Basel, Switzerland) · 2024
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  8. Genetic Aspects of Glaucoma: An Updated Review.Current molecular medicine · 2024
    Review
  9. Article
  10. Review
  11. Review
  12. Geographical Variability inJournal of clinical medicine · 2022
    Review
  13. Article
  14. Mechanistic Insights into Axenfeld-Rieger Syndrome from ZebrafishInternational journal of molecular sciences · 2021
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Sing-Hui LimDuke-National University of Singapore Graduate Medical School, Singapore, Republic of Singapore.
Khanh-Nhat Tran-Viet
Tammy L Yanovitch
Sharon F Freedman
Thomas Klemm
Whitney Call
Caldwell Powell
Ajay Ravichandran
Ravikanth Metlapally
Erica B Nading
Steve Rozen
Terri L Young
Center for Human Genetics · USDuke Medical Center · USDuke University · USNational University of Singapore · SGDuke University Hospital · US

Funding

The Molecular Genetics of High MyopiaR01EY014685 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI YOUNG, TERRI LOIS · 2003 to 2017
$8.1M
Genotype-Phenotype Correlations in Primary Congenital GlaucomaK23EY020554 · NEI · DUKE UNIVERSITY · PI YANOVITCH, TAMMY LYN · 2010 to 2011
$246k
NEI NIH HHS 1K23EY020554-01NEI NIH HHS 5K23EY020554-02NEI NIH HHS K23 EY020554NEI NIH HHS R01 EY014685
6 · The paper itself

Abstract

purposeTo screen primary congenital glaucoma patients in the United States for sequence variants within the CYP1B1, LTBP2, and MYOC genes using Sanger and whole exome sequencing.

designRetrospective case-control study.

methodsFifty-seven primary congenital glaucoma patients (47 families), 71 unaffected family members of the primary congenital glaucoma probands, and 101 healthy unrelated individuals were recruited from a single institution. Sanger sequencing of the primary congenital glaucoma gene, CYP1B1, was performed on 47 proband deoxyribonucleic acid samples. Simultaneously, whole exome sequencing was conducted on 3 families, each including more than 1 affected individual. Concurrently, 33 of 47 primary congenital glaucoma probands with extended family deoxyribonucleic acid samples were screened for LTBP2 and MYOC gene mutations. Exome-sequenced variations were validated by additional Sanger sequencing to confirm segregation of filtered disease-causing single nucleotide variations.

resultsSeven primary congenital glaucoma families (14.9%) manifested disease phenotypes attributable to CYP1B1 mutations. One primary congenital glaucoma family possessed homozygous mutant alleles, whereas 6 families carried compound heterozygous mutations. Five novel combinations of compound heterozygous mutations were identified, of which 2 combinations were found with whole exome sequencing. No disease-causing mutations within the LTBP2 and MYOC genes were discovered.

conclusionsThis study analyzed CYP1B1, LTBP2, and MYOC mutations in a cohort of primary congenital glaucoma patients from the United States, applying whole exome sequencing as a complementary tool to Sanger sequencing. Whole exome sequencing, coupled with Sanger sequencing, may identify novel genes in primary congenital glaucoma patients who have no mutations in known primary congenital glaucoma genes.

Indexed as

MutationAryl Hydrocarbon HydroxylasesCase-Control StudiesCytochrome P-450 CYP1B1Cytoskeletal ProteinsDNA Mutational AnalysisExomeEye ProteinsFemaleGlycoproteinsHumansHydrophthalmosIntraocular PressureLatent TGF-beta Binding ProteinsMaleMyocilinAryl Hydrocarbon HydroxylasesCYP1B1 protein, humanCytochrome P-450 CYP1B1Cytoskeletal ProteinsEye ProteinsGlycoproteinsLatent TGF-beta Binding ProteinsLTBP2 protein, humanMyocilin

Identifiers

PMID23218701
PMCPMC3736560
OpenAlexW1963926818

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.