Evidence map›Paper›PMID 23217624›Full record

ReviewVirology2013

Snapshots: chromatin control of viral infection.

David M Knipe, Paul M Lieberman, Jae U Jung, Alison A McBride, Kevin V Morris, Melanie Ott, David Margolis, Amelia Nieto, Michael Nevels, Robin J Parks and 1 more

Abstract readReview
In one paragraph

Review in Virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 163 citations in OpenAlex.

  1. Article
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  9. Review
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  15. Review
  16. Article
  17. Article
  18. Dynamics of Viral and Host 3D Genome Structure upon Infection.Journal of microbiology and biotechnology · 2022
    Review
  19. Article
  20. Review

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 10 institutions in 4 countries.

David M KnipeDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA, USA.
Paul M Lieberman
Jae U Jung
Alison A McBride
Kevin V Morris
Melanie Ott
David Margolis
Amelia Nieto
Michael Nevels
Robin J Parks
Thomas M Kristie
National Institutes of Health · USCentro Nacional de Biotecnología · ESGladstone Institutes · USHarvard University · USInstitute of Medical Microbiology and Hygiene · DEOttawa Hospital · CAScripps Research Institute · USThe Wistar Institute · USUniversity of North Carolina at Chapel Hill · USUniversity of Southern California · US

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
Using NK Cells to eliminate the latent HIV reservoirU19AI096113 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WOELK, CHRISTOPHER H · 2011 to 2015
$39.5M
Transcriptional control of herpes simplex virus lytic infection and latency-reactivation cyclesZIAAI000712 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI KRISTIE, THOMAS M · 2009 to 2025
$13.0M
Replication mechanisms of human papillomaviruses (HPV)ZIAAI000713 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI MCBRIDE, ALISON · 2009 to 2025
$12.4M
Targeted Delivery Vechicles for OligonucleotidesP01AI099783 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI AKKINA, RAMESH · 2012 to 2016
$7.4M
Regulation of Epstein-Barr Virus LatencyR01CA093606 · NCI · WISTAR INSTITUTE · PI LIEBERMAN, PAUL M. · 2002 to 2022
$6.7M
Epigenetic Regulation of Epstein-Barr Virus Latency ProgramsR01DE017336 · NIDCR · WISTAR INSTITUTE · PI PAUL M. LIEBERMAN · 2005 to 2026
$6.5M
Regulation of KSHV LatencyR01CA117830 · NCI · WISTAR INSTITUTE · PI PAUL M. LIEBERMAN · 2006 to 2026
$6.4M
ORF36 Viral Kinase as a Transcriptional Regulator of KSHVP01DE019085 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SUN, REN · 2008 to 2012
$6.4M
HCF-1, A Mammalian Factor Controlling HSV Gene ExpressionZIAAI000711 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI KRISTIE, THOMAS M · 2009 to 2017
$5.4M
KSHV Epigenetic RegulationR01DE023926 · NIDCR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2013 to 2024
$4.2M
Role of Factor Acetylation in the Regulation of HIV TranscriptionR01AI083139 · NIAID · J. DAVID GLADSTONE INSTITUTES · PI OTT, MELANIE MARIA · 2009 to 2017
$3.9M
CIHRIntramural NIH HHS ZIA AI000711Intramural NIH HHS ZIA AI000712NCI NIH HHS R01 CA085678NCI NIH HHS R01CA085678NCI NIH HHS R01 CA093606NCI NIH HHS R01CA093606NCI NIH HHS R01 CA115284NCI NIH HHS R01 CA117830NCI NIH HHS R01CA117830NIAID NIH HHS AI063106NIAID NIH HHS AI083139NIAID NIH HHS AI099081NIAID NIH HHS P01 AI099783NIAID NIH HHS P01AI099783-01NIAID NIH HHS P30 AI027763NIAID NIH HHS R01 AI063106NIAID NIH HHS R01 AI099081NIAID NIH HHS R21 AI105909NIAID NIH HHS R56 AI096861NIAID NIH HHS R56AI096861-01NIAID NIH HHS U19 AI096113NIDA NIH HHS R01 DA030156NIDCR NIH HHS P01 DE019085NIDCR NIH HHS P01DE019085NIDCR NIH HHS R01 DE017336NIDCR NIH HHS R01DE017336NIDCR NIH HHS R01 DE023926PHS HHS 5-31536
6 · The paper itself

Abstract

Like their cellular host counterparts, many invading viral pathogens must contend with, modulate, and utilize the host cell's chromatin machinery to promote efficient lytic infection or control persistent-latent states. While not intended to be comprehensive, this review represents a compilation of conceptual snapshots of the dynamic interplay of viruses with the chromatin environment. Contributions focus on chromatin dynamics during infection, viral circumvention of cellular chromatin repression, chromatin organization of large DNA viruses, tethering and persistence, viral interactions with cellular chromatin modulation machinery, and control of viral latency-reactivation cycles.

Indexed as

Gene Expression Regulation, ViralGenome, ViralChromatinChromatin Assembly and DisassemblyDNA VirusesEpigenesis, GeneticHost-Pathogen InteractionsHumansRNA VirusesVirus DiseasesVirus LatencyVirus ReplicationChromatin

Identifiers

PMID23217624
PMCPMC3531885
OpenAlexW1987333937

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.