Evidence map›Paper›PMID 23216794›Full record

ArticleMolecular microbiology2013

Trypanosoma brucei Orc1 is essential for nuclear DNA replication and affects both VSG silencing and VSG switching.

Imaan Benmerzouga, Jeniffer Concepción-Acevedo, Hee-Sook Kim, Anthula V Vandoros, George A M Cross, Michele M Klingbeil, Bibo Li

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
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  5. RAD51-mediated R-loop formation acts to repair transcription-associated DNA breaks driving antigenic variation inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
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  9. Article
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  11. Regulation of Antigenic Variation byPathogens (Basel, Switzerland) · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Imaan BenmerzougaCenter for Gene Regulation in Health & Disease, Department of Biological, Geological, and Environmental Sciences, Cleveland State University, Cleveland, OH 44115, USA.
Jeniffer Concepción-Acevedo
Hee-Sook Kim
Anthula V Vandoros
George A M Cross
Michele M Klingbeil
Bibo Li
University of Massachusetts Amherst · USCleveland State University · USRockefeller University · US

Funding

MOLECULAR GENETICS OF TRYPANOSOME ANTIGENIC VARIATIONR01AI021729 · NIAID · ROCKEFELLER UNIVERSITY · PI CROSS, GEORGE ALAN MARTIN · 1985 to 2011
$5.3M
Mechanisms of RAP1 functions in monoallelic VSG expression in Trypanosoma bruceiR01AI066095 · NIAID · CLEVELAND STATE UNIVERSITY · PI LI, BIBO · 2007 to 2020
$5.2M
Nuclear DNA Replication Initiation Machinery in TrypanosomesR21AI085366 · NIAID · UNIVERSITY OF MASSACHUSETTS AMHERST · PI KLINGBEIL, MICHELE M · 2010 to 2011
$416k
NIAID NIH HHS R01 AI021729NIAID NIH HHS R01AI021729NIAID NIH HHS R01 AI066095NIAID NIH HHS R01AI066095NIAID NIH HHS R21 AI085366NIAID NIH HHS R21AI85366
6 · The paper itself

Abstract

Binding of the Origin Recognition Complex (ORC) to replication origins is essential for initiation of DNA replication, but ORC has non-essential functions outside of DNA replication, including in heterochromatic gene silencing and telomere maintenance. Trypanosoma brucei, a protozoan parasite that causes human African trypanosomiasis, uses antigenic variation as a major virulence mechanism to evade the host's immune attack by expressing its major surface antigen, the Variant Surface Glycoprotein (VSG), in a monoallelic manner. An Orc1/Cdc6 homologue has been identified in T. brucei, but its role in DNA replication has not been directly confirmed and its potential involvement in VSG repression or switching has not been thoroughly investigated. In this study, we show that TbOrc1 is essential for nuclear DNA replication in mammalian-infectious bloodstream and tsetse procyclic forms (BF and PF). Depletion of TbOrc1 resulted in derepression of telomere-linked silent VSGs in both BF and PF, and increased VSG switching particularly through the in situ transcriptional switching mechanism. TbOrc1 associates with telomere repeats but appears to do so independently of two known T. brucei telomere proteins, TbRAP1 and TbTRF. We conclude that TbOrc1 has conserved functions in DNA replication and is also required to control telomere-linked VSG expression and VSG switching.

Indexed as

Gene SilencingAntigenic VariationDNA, ProtozoanDNA ReplicationGenes, ProtozoanMembrane GlycoproteinsOrigin Recognition ComplexPromoter Regions, GeneticTrypanosoma brucei bruceiVariant Surface Glycoproteins, TrypanosomaDNA, ProtozoanMembrane GlycoproteinsOrigin Recognition ComplexVariant Surface Glycoproteins, Trypanosoma

Identifiers

PMID23216794
PMCPMC3535549
OpenAlexW1939736088

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.