Evidence map›Paper›PMID 23213424›Full record

ArticleBiology open2012

NuRD-dependent DNA methylation prevents ES cells from accessing a trophectoderm fate.

Paulina A Latos, Christine Helliwell, Olukunbi Mosaku, Dominika A Dudzinska, Bryony Stubbs, Maria Berdasco, Manel Esteller, Brian Hendrich

Open access · goldAbstract read
In one paragraph

Article in Biology open, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

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  9. Do short, frequent DNA sequence motifs mould the epigenome?Nature reviews. Molecular cell biology · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Paulina A LatosWellcome Trust Centre for Stem Cell Research, MRC Centre for Stem Cell Biology and Regenerative Medicine, University of Cambridge , Tennis Court Road, Cambridge, CB2 1QR , UK ; Babraham Institute, Babraham Research Campus , Cambridge, CB22 3AT , UK.
Christine Helliwell
Olukunbi Mosaku
Dominika A Dudzinska
Bryony Stubbs
Maria Berdasco
Manel Esteller
Brian Hendrich
Wellcome/MRC Cambridge Stem Cell Institute · GBInstitut d'Investigació Biomédica de Bellvitge · ESUniversity of Cambridge · GBMRC Centre for Regenerative Medicine · GB

Funding

Wellcome Trust 079249Wellcome Trust 098021
6 · The paper itself

Abstract

Embryonic Stem (ES) cells are able to give rise to the three germ layers of the embryo but are prevented from contributing to the trophoblast. The molecular nature of this barrier between embryonic and trophectodermal cell fates is not clear, but is known to involve DNA methylation. Here we demonstrate that the Nucleosome Remodeling and Deacetylation (NuRD) co-repressor complex maintains the developmental barrier between embryonic and trophectodermal cell fates by maintaining transcriptional silencing of trophectoderm determinant genes in ES cells. We further show that NuRD activity facilitates DNA methylation of several of its target promoters, where it acts non-redundantly with DNA methylation to enforce transcriptional silencing. NuRD-deficient ES cells fail to completely silence expression of the trophectoderm determinant genes Elf5 and Eomes, but this alone is not sufficient to induce transdifferentiation towards the trophectoderm fate. Rather this leaves ES cells capable of activating expression of trophectoderm-specific genes in response to appropriate extracellular signals, enabling them to commit to a trophectodermal cell fate. Our findings clarify the molecular nature of the developmental barrier between the embryonic and trophoblast cell fates, and establish a role for NuRD activity in specifying sites for de novo DNA methylation.

Indexed as

ChromatinDNA methylationNuRDStem cellsTrophectoderm

Identifiers

PMID23213424
PMCPMC3509455
OpenAlexW2097248071

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.