Evidence map›Paper›PMID 23213112›Full record

ArticleGlycobiology2013

Isolation of novel prototype galectins from the marine ball sponge Cinachyrella sp. guided by their modulatory activity on mammalian glutamate-gated ion channels.

Takuya Ueda, Yuka Nakamura, Caleb M Smith, Bryan A Copits, Akira Inoue, Takao Ojima, Satoko Matsunaga, Geoffrey T Swanson, Ryuichi Sakai

Open access · greenAbstract read
In one paragraph

Article in Glycobiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Review
  3. Afil, a Lectin fromMicroorganisms · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Takuya UedaFaculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho Hakodate, Hokkaido 041-8611, Japan.
Yuka Nakamura
Caleb M Smith
Bryan A Copits
Akira Inoue
Takao Ojima
Satoko Matsunaga
Geoffrey T Swanson
Ryuichi Sakai
Hokkaido University · JPNorthwestern University · US

Funding

Novel marine-derived ligands for probing GluR functionR01NS044322 · NINDS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI SWANSON, GEOFFREY T · 2002 to 2011
$2.6M
NINDS NIH HHS R01 NS044322
6 · The paper itself

Abstract

Here we report the bioactivity-guided isolation of novel galectins from the marine sponge Cinachyrella sp., collected from Iriomote Island, Japan. The lectin proteins, which we refer to as the Cinachyrella galectins (CchGs), were identified as the active principles in an aqueous sponge extract that modulated the function of mammalian ionotropic glutamate receptors. Aggregation of rabbit erythrocytes by CchGs was competed most effectively by galactosides but not mannose, a profile characteristic of members of the galectin family of oligosaccharide-binding proteins. The lectin activity was remarkably stable, with only a modest loss in hemagglutination after exposure of the protein to 100°C for 1 h, and showed little sensitivity to calcium concentration. CchG-1 and -2 appeared as 16 and 18 kDa in sodium dodecyl sulfate-polyacrylamide gel electrophoresis, respectively, whereas matrix-assisted laser desorption ionization-time-of-flight-mass spectrometry indicated broad ion clusters centered at 16,216 and 16,423, respectively. The amino acid sequences of the CchGs were deduced using a combination of Edman degradation and cDNA cloning and revealed that the proteins were distant orthologs of animal prototype galectins and that multiple isolectins comprised the CchGs. One of the isolectins was expressed as a recombinant protein and exhibited physico-chemical and biological properties comparable with those of the natural lectins. The biochemical properties of the CchGs as well as their unexpected activity on mammalian excitatory amino acid receptors suggest that further analysis of these new members of the galectin family will yield further glycobiological and neurophysiological insights.

Indexed as

Action PotentialsAmino Acid SequenceAnimalsCalciumGalactosidesGalectinsHEK293 CellsHemagglutinationHumansKainic Acid ReceptorsMaleMannoseMiceMolecular Sequence DataPhylogenyPoriferaCalciumGalactosidesGalectinsKainic Acid ReceptorsMannoseReceptors, AMPA

Identifiers

PMID23213112
PMCPMC3581077
OpenAlexW2164202792

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.