Evidence map›Paper›PMID 23212617›Full record

ArticleMolecular biology reports2013

Transcriptional regulation of tristetraprolin by NF-κB signaling in LPS-stimulated macrophages.

Yu-Ling Chen, Yu-Wun Jiang, Yu-Lun Su, Sheng-Chung Lee, Mau-Sun Chang, Ching-Jin Chang

Abstract read
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In one paragraph

Article in Molecular biology reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Post-transcriptional checkpoints in autoimmunity.Nature reviews. Rheumatology · 2023
    Review
  6. Review
  7. Review
  8. Article
  9. Complexity of TNF-α Signaling in Heart Disease.Journal of clinical medicine · 2020
    Review
  10. Review
  11. Promoter Methylation Leads to DecreasedFrontiers in medicine · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. AU-rich element-binding proteins in colorectal cancer.World journal of gastrointestinal oncology · 2019
    Review
  16. Roles of Tristetraprolin in Tumorigenesis.International journal of molecular sciences · 2018
    Review
  17. Article
  18. The role of RNA-binding protein tristetraprolin in cancer and immunity.Medical oncology (Northwood, London, England) · 2017
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yu-Ling ChenGraduate Institute of Biochemical Sciences, College of Life Science, National Taiwan University, Taipei, Taiwan.
Yu-Wun Jiang
Yu-Lun Su
Sheng-Chung Lee
Mau-Sun Chang
Ching-Jin Chang
National Taiwan University · TWInstitute of Mathematics, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lipopolysaccharide (LPS) treatment causes the marked changes of gene expression in macrophages. Tristetraprolin (TTP), which is an mRNA-destabilizing protein that negatively regulates the expression of pro-inflammatory mediators, is induced by LPS. To delineate the molecular mechanism of LPS-stimulated TTP expression, several inhibitors blocking different signaling pathways were used initially. We observed that inhibitors of the NF-κB signaling pathway could down-regulate the TTP expression during LPS-induction. Consistently, TTP expression was increased upon recombinant TNFα stimulation which activates NF-κB signaling. The 5' regulatory region of zfp36 gene spanning from -2 k to +50 was isolated, which contained a putative NF-κB-binding site located in -1859 to -1850. Analysis of luciferase reporter activity driven by a serial 5'-deletion of TTP promoter showed that NF-κB inhibitor-mediated suppression of LPS or TNFα induced activity was through the predicted κB-binding sites. When the NF-κB-binding site was mutated, the TTP promoter decreased its response to the ectopic expression of NF-κB. Physical interaction analysis including oligonucleotides competition, gel shift and chromatin immunoprecipitation assays demonstrated that NF-κB activated by LPS or TNFα bound to the TTP promoter specifically. These results suggested that during LPS stimulation, NF-κB signaling were activated to regulate the transcription of TTP mRNA.

Indexed as

Transcription, GeneticAnimalsDown-RegulationGene Expression RegulationHumansLipopolysaccharidesMacrophagesMiceNF-kappa BNIH 3T3 CellsPromoter Regions, GeneticRNA, MessengerSignal TransductionTristetraprolinTumor Necrosis Factor-alphaLipopolysaccharidesNF-kappa BRNA, MessengerTristetraprolinTumor Necrosis Factor-alpha

Identifiers

PMID23212617
OpenAlexW2039939592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.