Evidence map›Paper›PMID 23211669›Full record

ArticleInternational journal of molecular sciences2012

Molecular diversity assessment using Sequence Related Amplified Polymorphism (SRAP) Markers in Vicia faba L.

Salem S Alghamdi, Sulieman A Al-Faifi, Hussein M Migdadi, Muhammad Altaf Khan, Ehab H El-Harty, Megahed H Ammar

Abstract read
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Article in International journal of molecular sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

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0cells of the map it votes in
13citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
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  9. Genetic variability in Tunisian populations of faba bean (Physiology and molecular biology of plants : an international journal of functional plant biology · 2017
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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Salem S AlghamdiLegume Research Group, Plant production Department, Collage of Food and Agricultural Sciences, King Saud University, P.O. Box 2460, Riyadh 11451, Saudi Arabia. salem@ksu.edu.sa.
Sulieman A Al-Faifi
Hussein M Migdadi
Muhammad Altaf Khan
Ehab H El-Harty
Megahed H Ammar

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sequence-related amplified polymorphism (SRAP) markers were used to assess the genetic diversity and relationship among 58 faba bean (Vicia faba L.) genotypes. Fourteen SRAP primer combinations amplified a total of 1036 differently sized well-resolved peaks (fragments), of which all were polymorphic with a 0.96 PIC value and discriminated all of the 58 faba bean genotypes. An average pairwise similarity of 21% was revealed among the genotypes ranging from 2% to 65%. At a similarity of 28%, UPGMA clustered the genotypes into three main groups comprising 78% of the genotypes. The local landraces and most of the Egyptian genotypes in addition to the Sudan genotypes were grouped in the first main cluster. The advanced breeding lines were scattered in the second and third main clusters with breeding lines from the ICARDA and genotypes introduced from Egypt. At a similarity of 47%, all the genotypes formed separated clusters with the exceptions of Hassawi 1 and Hassawi 2. Group analysis of the genotypes according to their geographic origin and type showed that the landraces were grouped according to their origin, while others were grouped according to their seed type. To our knowledge, this is the first application of SRAP markers for the assessment of genetic diversity in faba bean. Such information will be useful to determine optimal breeding strategies to allow continued progress in faba bean breeding.

Indexed as

Genetic MarkersPolymorphism, GeneticGenes, PlantGenetic VariationGenotypeNucleic Acid Amplification TechniquesPhylogenySequence Analysis, DNAVicia fabaGenetic Markers

Identifiers

PMID23211669
PMCPMC3546701

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.