Evidence map›Paper›PMID 23210513›Full record

ArticleBiochemistry2012

Direct electrochemistry of Shewanella oneidensis cytochrome c nitrite reductase: evidence of interactions across the dimeric interface.

Evan T Judd, Matthew Youngblut, A Andrew Pacheco, Sean J Elliott

Abstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 28 citations in OpenAlex.

  1. Decoding in-cell respiratory enzyme dynamics by label-free in situ electrochemistry.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. CytochromeThe Journal of biological chemistry · 2020
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Contrasting catalytic profiles of multiheme nitrite reductases containing CxxCK heme-binding motifs.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2013
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Evan T JuddDepartment of Chemistry, Boston University, 590 Commonwealth Avenue, Boston, MA 02215, USA.
Matthew Youngblut
A Andrew Pacheco
Sean J Elliott
Boston University · USUniversity of Wisconsin–Milwaukee · US

Funding

The Electrochemistry of Diheme Cytochrome c PeroxidasesR01GM072663 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI ELLIOTT, SEAN J · 2006 to 2010
$1.2M
Probing the mechanism and diversity of multi-electron redox reactions in sulfiteF31GM099416 · NIGMS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI JUDD, EVAN THOMAS · 2011 to 2014
$153k
NIGMS NIH HHS F31 GM099416NIGMS NIH HHS F31-GM099416NIGMS NIH HHS GM072663NIGMS NIH HHS R01 GM072663
6 · The paper itself

Abstract

Shewanella oneidensis cytochrome c nitrite reductase (soNrfA), a dimeric enzyme that houses five c-type hemes per protomer, conducts the six-electron reduction of nitrite and the two-electron reduction of hydroxylamine. Protein film voltammetry (PFV) has been used to study the cytochrome c nitrite reductase from Escherichia coli (ecNrfA) previously, revealing catalytic reduction of both nitrite and hydroxylamine substrates by ecNrfA adsorbed to a graphite electrode that is characterized by "boosts" and attenuations in activity depending on the applied potential. Here, we use PFV to investigate the catalytic properties of soNrfA during both nitrite and hydroxylamine turnover and compare those properties to the properties of ecNrfA. Distinct differences in both the electrochemical and kinetic characteristics of soNrfA are observed; e.g., all detected electron transfer steps are one-electron in nature, contrary to what has been observed in ecNrfA [Angove, H. C., Cole, J. A., Richardson, D. J., and Butt, J. N. (2002) J. Biol. Chem. 277, 23374-23381]. Additionally, we find evidence of substrate inhibition during nitrite turnover and negative cooperativity during hydroxylamine turnover, neither of which has previously been observed in any cytochrome c nitrite reductase. Collectively, these data provide evidence that during catalysis, potential pathways of communication exist between the individual soNrfA monomers comprising the native homodimer.

Indexed as

Cytochromes a1Cytochromes c1ElectrochemistryElectron TransportEscherichia coliHydroxylamineNitrate ReductasesNitritesProtein MultimerizationShewanellaCytochromes a1Cytochromes c1Hydroxylaminenitrate reductase (cytochrome)Nitrate ReductasesNitrites

Identifiers

PMID23210513
PMCPMC3566639
OpenAlexW2025152574

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.